miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 168 bits (85), Expect = 5e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 1 atctgagactgaactgtcctttttcggttatcatggtaccgatgctgtagatctgaaagg 60
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 atctgagactgaactgccctttttcggttatcatggtaccgatgctgtagctctgaaagg 60
Query: 61 tacagtactgtgatagctgaagaatggtggtgccatc 97
||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tacagtactgtgatagctgaagaatggcggtgccatc 97
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 165 bits (83), Expect = 7e-42
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 7 gactgaactgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagt 66
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gactgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagt 60
Query: 67 actgtgatagctgaagaatggtggtgccatc 97
||||||||| |||||||||||||||||||||
Sbjct: 61 actgtgataactgaagaatggtggtgccatc 91
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>33188_bta-mir-101:mirbase
Length = 79
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 14 ctgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtga 73
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ctgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtga 60
Query: 74 tagctgaagaatggtggt 91
|| |||||||||||||||
Sbjct: 61 taactgaagaatggtggt 78
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 135 bits (68), Expect = 6e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 10 tgaactgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtact 69
|||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct: 4 tgaactgtcctttttcggttatcatggtaccggtgctgtgtatatgaaaggtacagtact 63
Query: 70 gtgatagctgaagaatggtggtgccatc 97
|||||| |||||||||||||||||||||
Sbjct: 64 gtgataactgaagaatggtggtgccatc 91
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 133 bits (67), Expect = 3e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatgtgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 127 bits (64), Expect = 2e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 18 cctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtgatagc 77
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 1 cctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataac 60
Query: 78 tgaagaatggtg 89
||||||||||||
Sbjct: 61 tgaagaatggtg 72
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 125 bits (63), Expect = 6e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 actgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtg 72
||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcacggtaccgatgctgtatatgtgaaaggtacagtactgtg 60
Query: 73 atagctgaagaatggtggt 91
||| |||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>25931_gga-mir-101:mirbase
Length = 79
Score = 109 bits (55), Expect = 4e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 17 tcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtgatag 76
||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
Query: 77 ctgaagaatggtggt 91
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 20 tttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtgatagctg 79
|||||||||||||||||||||| ||||||| | |||||||||||||||||||||| |||
Sbjct: 1 tttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactg 60
Query: 80 aagaatggtggt 91
||||||||||||
Sbjct: 61 aagaatggtggt 72
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 93.7 bits (47), Expect = 2e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 26 ggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtgatagctga 80
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 1 ggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 55
>34728_tni-mir-101b:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 10 tgaactgtcctttttcggttatcatggtaccgatgctgt 48
|||||||||| ||||||||||||||||||||| ||||||
Sbjct: 1 tgaactgtccattttcggttatcatggtaccgctgctgt 39
>34265_dre-mir-101a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 41 gatgctgtagatctgaaaggtacagtactgtgatagctgaagaatgg 87
|||||||| |||| |||||||||||||||||||| |||||| ||||
Sbjct: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
>34581_fru-mir-101b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 tgaactgtcctttttcggttatcatggtaccgatgctgt 48
|||||||||| ||||| ||||||||||||||| ||||||
Sbjct: 1 tgaactgtccattttcagttatcatggtaccgctgctgt 39
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatggt 88
|||||||||||||||||||| |||||| |||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatggt 78
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaaggatgg 75
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaaggatgg 68
>27502_age-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27564_lla-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27611_sla-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28202_mne-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28294_ggo-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30081_ppa-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30804_ppy-mir-101:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>32709_rno-mir-101a:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaagaatgg 87
|||||||||||||||||||| |||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 aaggtacagtactgtgatagctgaagaatgg 87
||||||||||||||||||| |||||| ||||
Sbjct: 47 aaggtacagtactgtgataactgaaggatgg 77
>34266_dre-mir-101b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 tgaactgtcctttttcggttatcatggtaccgatgctgt 48
|||| ||||| ||||| ||||||||||||||| ||||||
Sbjct: 13 tgaattgtccattttcagttatcatggtaccggtgctgt 51
>34580_fru-mir-101a:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 aaggtacagtactgtgatagctgaagaatgg 87
||||||||||||||||||| |||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>34727_tni-mir-101a:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 aaggtacagtactgtgatagctgaagaatgg 87
||||||||||||||||||| |||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>26998_eca-mir-101:mirbase
Length = 59
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctgaa 81
|||||||||||||||||||| |||||
Sbjct: 34 aaaggtacagtactgtgataactgaa 59
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 aaaggtacagtactgtgatagctga 80
|||||||||||||||||||| ||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
