miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32014_mmu-mir-344-1:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 gcagccagggtttttaccagtcaggctcctggctagattccaggtaccaactggtacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3 gcagccagggtttttaccagtcaggctcctggctagattccaggtaccagctggtacctg 62
Query: 61 atctagccaaagcctgactgtaagc 85
|||||||||||||||||||||||||
Sbjct: 63 atctagccaaagcctgactgtaagc 87
>32865_rno-mir-344a-1:mirbase
Length = 98
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 1 gcagccagggtttttaccagtcaggctcctggctagattccaggtaccaactggtacctg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcagccagagtttttaccagtcaggctcctggctagattccaggtaccaactggtacctg 62
Query: 61 atctagccaaagcctgactgtaagctgtaaaa 92
|||||||||||||||||| |||||||| ||||
Sbjct: 63 atctagccaaagcctgaccgtaagctgcaaaa 94
>32866_rno-mir-344a-1:mirbase
Length = 98
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 1 gcagccagggtttttaccagtcaggctcctggctagattccaggtaccaactggtacctg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcagccagagtttttaccagtcaggctcctggctagattccaggtaccaactggtacctg 62
Query: 61 atctagccaaagcctgactgtaagctgtaaaa 92
|||||||||||||||||| |||||||| ||||
Sbjct: 63 atctagccaaagcctgaccgtaagctgcaaaa 94
>32015_mmu-mir-344-2:mirbase
Length = 80
Score = 153 bits (77), Expect = 3e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 11 tttttaccagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttaccagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaa 60
Query: 71 agcctgactgtaagctg 87
|||||||||||||||||
Sbjct: 61 agcctgactgtaagctg 77
>32017_mmu-mir-344c:mirbase
Length = 92
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 7 agggtttttaccagtcaggctcctggctagattccaggtaccaactggtacctgatctag 66
||||||||| |||||||||| ||||||||| | ||| || || ||||||||||||||||
Sbjct: 6 agggtttttttcagtcaggctgctggctagagtacagctatcagctggtacctgatctag 65
Query: 67 ccaaagcctgactgtaa 83
||||||||||| ||||
Sbjct: 66 tcaaagcctgacagtaa 82
>32016_mmu-mir-344b:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tagccaaagcctgactgtaag 84
|||||||||||||||||||||
Sbjct: 43 tagccaaagcctgactgtaag 63
