miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32028_mmu-mir-346:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
Query: 61 ggctgggcctgcagctgcctgggcagagctgctccttc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctgggcctgcagctgcctgggcagagctgctccttc 98
>27139_eca-mir-346:mirbase
Length = 95
Score = 145 bits (73), Expect = 7e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>28595_hsa-mir-346:mirbase
Length = 95
Score = 145 bits (73), Expect = 7e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>30339_ptr-mir-346:mirbase
Length = 94
Score = 145 bits (73), Expect = 7e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>30962_ppy-mir-346:mirbase
Length = 95
Score = 145 bits (73), Expect = 7e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>33333_bta-mir-346:mirbase
Length = 95
Score = 137 bits (69), Expect = 2e-33
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||| ||||||||||||||||||||
Sbjct: 65 ggctgggcttgcagctgcctgggcagagc 93
>27858_mml-mir-346:mirbase
Length = 86
Score = 133 bits (67), Expect = 3e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 14 tctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcaggggctgggcctgca 73
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcaggggctgggcctgca 61
Query: 74 gctgcctgggcagagctgctcct 96
|||||||||||||||| ||||||
Sbjct: 62 gctgcctgggcagagcggctcct 84
>26809_cfa-mir-346:mirbase
Length = 95
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||| ||||| |||||||||| | ||||||||||| |||||||| ||||||||||||
Sbjct: 5 tctgtggtgggcgtctgtctgcccgcatgcctgcctctttgttgctcggaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
