miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32057_mmu-mir-384:mirbase
Length = 88
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
|||||||||||||||||||||||
Sbjct: 66 aattgttcacaatgcctgtaaca 88
>32058_mmu-mir-384:mirbase
Length = 88
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
|||||||||||||||||||||||
Sbjct: 66 aattgttcacaatgcctgtaaca 88
>32900_rno-mir-384:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
Query: 61 aattgttcacaatgcctgtaaca 83
|||||||||||||||||||||||
Sbjct: 61 aattgttcacaatgcctgtaaca 83
>27166_eca-mir-384:mirbase
Length = 88
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 aatcaggagttgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
|||||||||||||||||||||||
Sbjct: 66 aattgttcacaatgcctgtaaca 88
>26835_cfa-mir-384:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 11 tgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctagaaattgttcac 70
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattcctagaaattgttcac 60
Query: 71 aat 73
|||
Sbjct: 61 aat 63
>27890_mml-mir-384:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 5 aggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctagaaatt 64
||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||
Sbjct: 10 aggaattgtaaacaattcctaggcaatatgtataatgttcataagacattcctagaaatt 69
Query: 65 gttcacaatgcctgtaaca 83
||||| |||||||||||||
Sbjct: 70 gttcataatgcctgtaaca 88
>28637_hsa-mir-384:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 6 aatcaggaattttaaacaattcctagacaatatgtataatgttcataagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
||||||||| |||||||||||||
Sbjct: 66 aattgttcataatgcctgtaaca 88
>30991_ppy-mir-384:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
|||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 6 aatcaggaattgtaaacaattcctagacaatatgtataatgttcataagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
|||| |||| |||||||||||||
Sbjct: 66 aatttttcataatgcctgtaaca 88
