miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32059_mmu-mir-409:mirbase
Length = 79
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>32060_mmu-mir-409:mirbase
Length = 79
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>32903_rno-mir-409:mirbase
Length = 77
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 61 aaccccttttcggtatc 77
>33076_rno-mir-3581:mirbase
Length = 80
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 20
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 19 aaccccttttcggtatc 3
>27167_eca-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>27168_eca-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>27891_mml-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>27892_mml-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>28638_hsa-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>28639_hsa-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>30364_ptr-mir-409:mirbase
Length = 78
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 60
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 61 aaccccttttcggtatc 77
>30992_ppy-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>30993_ppy-mir-409:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>33361_bta-mir-409a:mirbase
Length = 79
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtacgcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 61
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 62 aaccccttttcggtatc 78
>33362_bta-mir-409b:mirbase
Length = 79
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 78 ggtacgcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 19
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 18 aaccccttttcggtatc 2
>33836_oar-mir-409:mirbase
Length = 101
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10 ggtacgcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 69
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 70 aaccccttttcggtatc 86
>33837_oar-mir-409:mirbase
Length = 101
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 60
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10 ggtacgcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 69
Query: 61 aaccccttttcggtatc 77
|||||||||||||||||
Sbjct: 70 aaccccttttcggtatc 86
>26836_cfa-mir-409:mirbase
Length = 54
Score = 91.7 bits (46), Expect = 7e-20
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 14 aggttacccgagcaactttgcatctggaggacgaatgttgctcggtgaacccct 67
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1 aggttacccgagcaactttgcatctggacgacgaatgttgctcgttgaacccct 54
