miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27898_mml-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>27899_mml-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>28645_hsa-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>28646_hsa-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>30370_ptr-mir-423:mirbase
Length = 93
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>30999_ppy-mir-423:mirbase
Length = 90
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 62
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 63 cccctcagtcttgcttcct 81
>31000_ppy-mir-423:mirbase
Length = 90
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 62
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 63 cccctcagtcttgcttcct 81
>32066_mmu-mir-423:mirbase
Length = 109
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 78
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 79 cccctcagtcttgcttcct 97
>32067_mmu-mir-423:mirbase
Length = 109
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 78
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 79 cccctcagtcttgcttcct 97
>33367_bta-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>33368_bta-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
Query: 61 cccctcagtcttgcttcct 79
|||||||||||||||||||
Sbjct: 67 cccctcagtcttgcttcct 85
>34089_ssc-mir-423:mirbase
Length = 80
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 2 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 62 ccctcagtcttgcttcct 79
||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcct 78
>34090_ssc-mir-423:mirbase
Length = 80
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 2 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 62 ccctcagtcttgcttcct 79
||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcct 78
>29349_hsa-mir-3184:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 2 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 16
Query: 62 ccctcagtcttgctt 76
|||||||||||||||
Sbjct: 15 ccctcagtcttgctt 1
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 7 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 67 agt 69
|||
Sbjct: 61 agt 63
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 7 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 67 agt 69
|||
Sbjct: 61 agt 63
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 11 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 59
