miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32068_mmu-mir-425:mirbase
Length = 85
Score = 157 bits (79), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 62
Query: 61 atcgtgtccgcccagtgctcttt 83
||||||||||||||||||||||
Sbjct: 63 gtcgtgtccgcccagtgctcttt 85
>33370_bta-mir-425:mirbase
Length = 87
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>33371_bta-mir-425:mirbase
Length = 87
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>28648_hsa-mir-425:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>30372_ptr-mir-425:mirbase
Length = 86
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>31002_ppy-mir-425:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>34092_ssc-mir-425:mirbase
Length = 80
Score = 141 bits (71), Expect = 9e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaat 61
Query: 61 atcgtgtccgcccagtgct 79
||||||||||||||||||
Sbjct: 62 gtcgtgtccgcccagtgct 80
>34093_ssc-mir-425:mirbase
Length = 80
Score = 141 bits (71), Expect = 9e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaat 61
Query: 61 atcgtgtccgcccagtgct 79
||||||||||||||||||
Sbjct: 62 gtcgtgtccgcccagtgct 80
>27901_mml-mir-425:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 7 gctttggaatgacacgatcactcccgttgagtgggcccccgagaagccatcgggaatgtc 66
Query: 64 gtgtccgcccagtgctcttt 83
||||||||||||||||||||
Sbjct: 67 gtgtccgcccagtgctcttt 86
>27449_mdo-mir-425:mirbase
Length = 85
Score = 125 bits (63), Expect = 5e-30
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 1 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 60
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 3 agtgctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcgggaat 62
Query: 61 atcgtgtccgcccagtgctcttt 83
|||||||||| ||| ||||||||
Sbjct: 63 atcgtgtccgtccaatgctcttt 85
>26842_cfa-mir-425:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 11 aatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatcgtgtccg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtcgtgtccg 60
Query: 71 ccc 73
|||
Sbjct: 61 ccc 63
>31551_oan-mir-425:mirbase
Length = 103
Score = 111 bits (56), Expect = 8e-26
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 13 gctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcgggaatatc 72
Query: 64 gtgtccgcccagtgctcttt 83
||||||| ||| |||||||
Sbjct: 73 gtgtccgtccaaagctcttt 92
>25855_xtr-mir-425:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggaatgacacgatcactcccgttgag 34
||||||||||||||||||||||||||||
Sbjct: 4 ttggaatgacacgatcactcccgttgag 31
>26530_tgu-mir-425:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgag 34
|||||||||||||||||||||||||| ||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgag 39
>26531_tgu-mir-425:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 gctttggaatgacacgatcactcccgttgag 34
|||||||||||||||||||||||||| ||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgag 39
