miRNEST 2.0, an integrative microRNA resource :: BLAST
>27634_mml-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>28344_hsa-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30736_ppy-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30131_ptr-let-7d:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 ctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggtaa 61
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60
Query: 62 ctatacgacctgctgcctttcttagg 87
||||||||||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86
>26932_eca-let-7d:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>27322_mdo-let-7d:mirbase
Length = 106
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 9 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagtta 68
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95
>31757_mmu-let-7d:mirbase
Length = 103
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct: 9 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 68
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 69 actatacgacctgctgcctttcttagg 95
>32643_rno-let-7d:mirbase
Length = 98
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct: 7 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 66
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 67 actatacgacctgctgcctttcttagg 93
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Minus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct: 90 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 31
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 30 actatacgacctgctgcctttcttagg 4
>25873_gga-let-7d:mirbase
Length = 103
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
|||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95
>26382_tgu-let-7d:mirbase
Length = 92
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 4 cctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggta 63
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 64 actatacaacctgctgcctttcttagg 90
>31411_oan-let-7d:mirbase
Length = 116
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
||||||||||||||||||||||||||||||| |||||| |||||||| || |||| | ||
Sbjct: 17 cctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataaggtgtta 76
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 77 actatacaacctgctgcctttcttagg 103
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttcgggc 36
|||||||||||||| |||||||| ||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 14 gaggtagtaggttgtatagtttt 36
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 5 gaggtagtaggttgtatagtttt 27
>26377_tgu-let-7a-3:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 62 gaggtagtaggttgtatagtttt 84
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 16 gaggtagtaggttgtatagtttt 38
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 7 gaggtagtaggttgtatagtttt 29
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 7 gaggtagtaggttgtatagtttt 29
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 6 gaggtagtaggttgtatagtttt 28
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 7 gaggtagtaggttgtatagtttt 29
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 14 gaggtagtaggttgtatagtttt 36
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 14 gaggtagtaggttgtatagtttt 36
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 7 gaggtagtaggttgtatagtttt 29
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 12 gaggtagtaggttgtatagtttt 34
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 12 gaggtagtaggttgtatagtttt 34
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 5 gaggtagtaggttgtatagtttt 27
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagtttt 31
|||||||||||||| ||||||||
Sbjct: 13 gaggtagtaggttgtatagtttt 35
