miRNEST 2.0, an integrative microRNA resource :: BLAST
>27649_mml-mir-10b:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>28169_mne-mir-10b:mirbase
Length = 109
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatatagtcacagatt 71
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 72 cgattctaggggaatatatggtcgatgcaaaaac 105
>28257_ggo-mir-10b:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>30750_ppy-mir-10b:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>26622_cfa-mir-10b:mirbase
Length = 101
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccacatagtcacagatt 63
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 64 cgattctaggggaatatatggtcgatgcaaaaac 97
>28359_hsa-mir-10b:mirbase
Length = 110
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>30041_ppa-mir-10b:mirbase
Length = 110
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>30145_ptr-mir-10b:mirbase
Length = 109
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 12 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccgtatagtcacagatt 71
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 72 cgattctaggggaatatatggtcgatgcaaaaac 105
>25890_gga-mir-10b:mirbase
Length = 110
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtgatattcatatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>31424_oan-mir-10b:mirbase
Length = 107
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 11 acgttgtctatatataccctgtagaaccgaatttgtgtggtattcacatagtcacagatt 70
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 71 cgattctaggggaatatatggtcgatgcaaaaac 104
>32657_rno-mir-10b:mirbase
Length = 109
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 12 acgttgtctatatataccctgtagaaccgaatttgtgtggtacccacatagtcacagatt 71
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 72 cgattctaggggaatatatggtcgatgcaaaaac 105
>27332_mdo-mir-10b:mirbase
Length = 111
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 13 acgttgtctatatataccctgtagaaccgaatttgtgtggtatttacatagtcacagatt 72
Query: 66 cgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 73 cgattctaggggaatatatggtcgatgcaaaaac 106
>33910_ssc-mir-10b:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagattcgatt 70
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gtctatatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgatt 60
Query: 71 ctaggggaatatatggtcga 90
||||||||||||||||||||
Sbjct: 61 ctaggggaatatatggtcga 80
>26944_eca-mir-10b:mirbase
Length = 68
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagattcgattctagg 75
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tatataccctgtagaaccgaatttgtgtggtatccacatagtcacagattcgattctagg 60
Query: 76 ggaatata 83
||||||||
Sbjct: 61 ggaatata 68
>31774_mmu-mir-10b:mirbase
Length = 68
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagattcgattctagg 75
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 1 tatataccctgtagaaccgaatttgtgtggtacccacatagtcacagattcgattctagg 60
Query: 76 ggaatata 83
||||||||
Sbjct: 61 ggaatata 68
>25695_xtr-mir-10b:mirbase
Length = 88
Score = 107 bits (54), Expect = 1e-24
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 6 acgttgtctatatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagatt 65
||||||||||||| |||||||||||||||||||||||||| | | | |||||||||||
Sbjct: 2 acgttgtctatatgtaccctgtagaaccgaatttgtgtgg--ttcgtacagtcacagatt 59
Query: 66 cgattctaggggaatatatggtcgatgca 94
|||||||||||| ||||||||||||||||
Sbjct: 60 cgattctagggggatatatggtcgatgca 88
>34198_dre-mir-10b-1:mirbase
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgtg 44
||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctatatataccctgtagaaccgaatttgtgtg 34
>34541_fru-mir-10b-1:mirbase
Length = 70
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 15 atatataccctgtagaaccgaatttgtgtggtatccatgtagtcacagattcgattctag 74
|||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 1 atatataccctgtagaaccgaatttgtgtgatggcgtcaaagtcacagattcgattctag 60
Query: 75 gggaatatat 84
|||| |||||
Sbjct: 61 gggagtatat 70
>34542_fru-mir-10b-2:mirbase
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 gttgtctatatataccctgtagaaccgaatttgtgtg 44
||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gttgtctatatgtaccctgtagaaccgaatttgtgtg 37
>34689_tni-mir-10b-1:mirbase
Length = 83
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 gttgtctatatataccctgtagaaccgaatttgtgtg 44
||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gttgtctatatgtaccctgtagaaccgaatttgtgtg 37
>34690_tni-mir-10b-2:mirbase
Length = 70
Score = 65.9 bits (33), Expect = 5e-12
Identities = 64/73 (87%), Gaps = 6/73 (8%)
Strand = Plus / Plus
Query: 15 atatataccctgtagaaccgaatttgtgtggtatccatgt---agtcacagattcgattc 71
|||||||||||||||||||||||||||||| | || || |||||||||||||||||
Sbjct: 1 atatataccctgtagaaccgaatttgtgtgat---caagtcacagtcacagattcgattc 57
Query: 72 taggggaatatat 84
||||||| |||||
Sbjct: 58 taggggagtatat 70
>34197_dre-mir-10a:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tctatatataccctgtagaaccgaatttgtgtg 44
||||||||||||||||||| |||||||||||||
Sbjct: 10 tctatatataccctgtagatccgaatttgtgtg 42
>34199_dre-mir-10b-2:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgt 43
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gtctatatgtaccctgtagaaccgaatttgtgt 39
>34201_dre-mir-10d:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgt 43
||||||||||||||||||||||||||| |||||
Sbjct: 19 gtctatatataccctgtagaaccgaatgtgtgt 51
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 57 tcacagattcgattctaggggaatatatggtcgatgcaaaaac 99
||||||||||| || ||||||| ||||||| ||||||||||||
Sbjct: 65 tcacagattcggttttaggggagtatatggacgatgcaaaaac 107
>34544_fru-mir-10d:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgtg 44
||||||| ||||||||||||||||||| ||||||
Sbjct: 19 gtctataaataccctgtagaaccgaatgtgtgtg 52
>34692_tni-mir-10d:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gtctatatataccctgtagaaccgaatttgtgtg 44
||||||| ||||||||||||||||||| ||||||
Sbjct: 19 gtctatacataccctgtagaaccgaatgtgtgtg 52
>24650_bfl-mir-10a:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 ctatatataccctgtagaaccgaatttgtgtg 44
|||||| ||||||||||| |||||||||||||
Sbjct: 1 ctatatgtaccctgtagatccgaatttgtgtg 32
>26943_eca-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27331_mdo-mir-10a:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 11 tatataccctgtagatccgaatttgtgt 38
>27477_age-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27587_sla-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>27648_mml-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>28256_ggo-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>28358_hsa-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>30040_ppa-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>30144_ptr-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 17 tatataccctgtagatccgaatttgtgt 44
>31423_oan-mir-10a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 24 tatataccctgtagatccgaatttgtgt 51
>31773_mmu-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>32655_rno-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>32656_rno-mir-10a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>33126_bta-mir-10a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 18 tatataccctgtagatccgaatttgtgt 45
>33909_ssc-mir-10a:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||||||||| ||||||||||||
Sbjct: 5 tatataccctgtagatccgaatttgtgt 32
>34200_dre-mir-10c:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 tctatatataccctgtagaaccgaatttgtgt 43
||||||||||||||||||| ||| ||||||||
Sbjct: 8 tctatatataccctgtagatccggatttgtgt 39
>25889_gga-mir-10a:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 ctatatataccctgtagaaccgaatttgtgt 43
|||||| ||||||||||| ||||||||||||
Sbjct: 1 ctatatgtaccctgtagatccgaatttgtgt 31
>25694_xtr-mir-10a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 taccctgtagaaccgaatttgtgtg 44
||||||||||| |||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtgtg 46
>38853_lgi-mir-10:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 taccctgtagaaccgaatttgtgt 43
||||||||||| ||||||||||||
Sbjct: 21 taccctgtagatccgaatttgtgt 44
>25696_xtr-mir-10c:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 accctgtagaaccgaatttgtgtg 44
||||||||||| ||||||||||||
Sbjct: 8 accctgtagaatcgaatttgtgtg 31
>26621_cfa-mir-10:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 taccctgtagaaccgaatttgtgt 43
||||||||||| ||||||||||||
Sbjct: 1 taccctgtagatccgaatttgtgt 24
>30749_ppy-mir-10a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tatataccctgtagaaccgaatttgtgt 43
||||||||| ||||| ||||||||||||
Sbjct: 18 tatataccccgtagatccgaatttgtgt 45
>34543_fru-mir-10c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 tctatatataccctgtagaaccgaatttgtgt 43
||||||| ||||||||||| ||| ||||||||
Sbjct: 7 tctatatctaccctgtagatccggatttgtgt 38
>34691_tni-mir-10c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 tctatatataccctgtagaaccgaatttgtgt 43
||||||| ||||||||||| ||| ||||||||
Sbjct: 13 tctatatctaccctgtagatccggatttgtgt 44
