miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33947_ssc-mir-32:mirbase
Length = 70
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>26981_eca-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcacgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>27603_sla-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>27688_mml-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>28195_mne-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>28283_ggo-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>28398_hsa-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>30070_ppa-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>30184_ptr-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>30788_ppy-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>31813_mmu-mir-32:mirbase
Length = 70
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
||||||||||
Sbjct: 61 tgatattttc 70
>27358_mdo-mir-32:mirbase
Length = 69
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggctttagtgcaatttagtatgtg 60
Query: 61 tgatatttt 69
|||||||||
Sbjct: 61 tgatatttt 69
>25923_gga-mir-32:mirbase
Length = 70
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
|||| ||||
Sbjct: 61 cgatactttc 70
>26660_cfa-mir-32:mirbase
Length = 62
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 6 tattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtgtgata 65
|||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1 tattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtgtgata 60
Query: 66 tt 67
||
Sbjct: 61 tt 62
>32695_rno-mir-32:mirbase
Length = 70
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 6 tattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtgtgata 65
|||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 6 tattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtgtgata 65
Query: 66 tt 67
||
Sbjct: 66 tt 67
>31457_oan-mir-32:mirbase
Length = 116
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 23 ggagatattgcacattactaagttgcatgttgtcaaggcctctgtgcaatttagtgtgtg 82
Query: 61 tgatattttc 70
|||||||||
Sbjct: 83 cgatattttc 92
>26430_tgu-mir-32:mirbase
Length = 71
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
|||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
Query: 61 tgata 65
||||
Sbjct: 66 cgata 70
