miRNEST 2.0, an integrative microRNA resource :: BLAST
>39859_aly-MIR319b:mirbase
Length = 246
Score = 343 bits (173), Expect = 3e-95
Identities = 185/189 (97%)
Strand = Plus / Plus
Query: 1 ggtggaggaagagagctttcttcggtccactcatggagtaatatgtgagatttaattgac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 ggtgaaggaagagagctttcttcggtccactcatggagtaatatgtgagatttaattgac 90
Query: 61 tctcgactcattcatccaaataccaaatgaaagaatttgttctcatatggtaaatgaatg 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 91 tctcgactcattcatccaaataccaaatgaaagaacatgttctcatatggtaaatgaatg 150
Query: 121 aatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaagggagctccc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaagggagctccc 210
Query: 181 tatttttat 189
|||||||||
Sbjct: 211 tatttttat 219
>40070_ath-MIR319b:mirbase
Length = 172
Score = 333 bits (168), Expect = 3e-92
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 10 agagagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactc 60
Query: 70 attcatccaaataccaaatgaaagaatttgttctcatatggtaaatgaatgaatgatgcg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcatccaaataccaaatgaaagaatttgttctcatatggtaaatgaatgaatgatgcg 120
Query: 130 agggacaaattgagtcttcacttctctatgcttggactgaagggagctccct 181
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagacaaattgagtcttcacttctctatgcttggactgaagggagctccct 172
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 112 aaatgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaag 171
|||||| ||||||||||| | |||||||||| |||| | || |||| ||||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
Query: 172 ggagctccct 181
||||||||||
Sbjct: 167 ggagctccct 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
|||||||||||||| ||||||||||||
Sbjct: 2 aagagagctttctttagtccactcatgg 29
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 110 gtaaatgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactga 169
|||||||| ||||||||||| | ||||||||| |||| | || || ||||||||||||
Sbjct: 100 gtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactga 159
Query: 170 agggagctccct 181
||||||||||||
Sbjct: 160 agggagctccct 171
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gaagagagctttcttcggtccactcatgg 36
|||||||||||||||| ||||||||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgg 36
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 cgactcattcatccaaatac 83
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>41282_ctr-MIR319:mirbase
Length = 186
Score = 63.9 bits (32), Expect = 4e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 110 gtaaatgaatgaatgatgcgagggacaaattgagtcttca-cttctctatgcttggactg 168
|||||||| ||||||||||| | |||||||||| |||| | |||| || |||||||||||
Sbjct: 106 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtgcttggactg 164
Query: 169 aagggagctccc 180
||||||||||||
Sbjct: 165 aagggagctccc 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 gagctttcttcggtccactcatgg 36
||||||||||||||||||| ||||
Sbjct: 10 gagctttcttcggtccacttatgg 33
>40465_gma-MIR319b:mirbase
Length = 208
Score = 60.0 bits (30), Expect = 6e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 112 aaatgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaag 171
|||||| ||||||||||| | |||||||||| |||| | || || | ||||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
Query: 172 ggagctccct 181
||||||||||
Sbjct: 181 ggagctccct 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
||||||||||||||| ||||||| ||||
Sbjct: 19 aagagagctttcttcagtccacttatgg 46
>40369_rco-MIR319c:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 145 cttcacttctctatgcttggactgaagggagctccct 181
|||| ||||||| ||||||||||||||||||||||||
Sbjct: 147 cttctcttctctgtgcttggactgaagggagctccct 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
||||||||| ||||| ||||||||||||
Sbjct: 3 aagagagctctcttcagtccactcatgg 30
>40367_rco-MIR319a:mirbase
Length = 211
Score = 58.0 bits (29), Expect = 3e-09
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 110 gtaaatgaatgaatgatgcgagggacaaattgagtcttca-cttctctatgcttggactg 168
|||||||| ||||||||||| | |||||||||| |||| | |||| || | |||||||||
Sbjct: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactg 193
Query: 169 aagggagctccct 181
|||||||||||||
Sbjct: 194 aagggagctccct 206
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
||||||||||||||| ||||||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgg 30
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 cgactcattcatccaaatac 83
||||||||||||||||||||
Sbjct: 56 cgactcattcatccaaatac 75
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 150 cttctctatgcttggactgaagggagctccct 181
||||||| ||||||||||||||||||||||||
Sbjct: 154 cttctctgtgcttggactgaagggagctccct 185
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 150 cttctctatgcttggactgaagggagctccct 181
||||||| ||||||||||||||||||||||||
Sbjct: 157 cttctctgtgcttggactgaagggagctccct 188
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgga 37
||||||||||||||| |||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgga 37
>40464_gma-MIR319a:mirbase
Length = 207
Score = 56.0 bits (28), Expect = 1e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 114 atgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaaggg 173
|||| ||||||||||| | |||||||||| |||| | || || | ||||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181
Query: 174 agctccct 181
||||||||
Sbjct: 182 agctccct 189
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
||||||||||||||| ||||||||||||
Sbjct: 19 aagagagctttcttcagtccactcatgg 46
>40069_ath-MIR319a:mirbase
Length = 176
Score = 54.0 bits (27), Expect = 4e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 111 taaatgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaa 170
||||||||||||||||||| ||||||||| || | |||||| || ||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
Query: 171 gggagctccct 181
|||||||||||
Sbjct: 164 gggagctccct 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 cgactcattcatccaaatacc 84
|||||||||||||||||||||
Sbjct: 55 cgactcattcatccaaatacc 75
>39858_aly-MIR319a:mirbase
Length = 221
Score = 54.0 bits (27), Expect = 4e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 111 taaatgaatgaatgatgcgagggacaaattgagtcttcacttctctatgcttggactgaa 170
||||||||||||||||||| ||||||||| || | |||||| || ||||||||||
Sbjct: 127 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 186
Query: 171 gggagctccct 181
|||||||||||
Sbjct: 187 gggagctccct 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 cgactcattcatccaaatacc 84
|||||||||||||||||||||
Sbjct: 78 cgactcattcatccaaatacc 98
>42642_tae-MIR319:mirbase
Length = 211
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 157 atgcttggactgaagggagctccct 181
|||||||||||||||||||||||||
Sbjct: 180 atgcttggactgaagggagctccct 204
>41770_bdi-MIR319:mirbase
Length = 280
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 157 atgcttggactgaagggagctccct 181
|||||||||||||||||||||||||
Sbjct: 222 atgcttggactgaagggagctccct 246
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 50.1 bits (25), Expect = 6e-07
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 110 gtaaatgaatgaatgatgcgagggacaaattgagtcttca-cttctctatgcttggactg 168
|||||||||||| ||||||| | |||||||| | |||| | |||| |||| ||||||||
Sbjct: 106 gtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttc-ctatcattggactg 164
Query: 169 aagggagctccct 181
|||||||||||||
Sbjct: 165 aagggagctccct 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 cgactcattcatccaaatac 83
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 6e-07
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 110 gtaaatgaatgaatgatgcgagggacaaattgagtcttca-cttctctatgcttggactg 168
|||||||| ||||||||||| | |||||||||| || | | |||| || | |||||||||
Sbjct: 109 gtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttc-ctgtacttggactg 167
Query: 169 aagggagctccct 181
|||||||||||||
Sbjct: 168 aagggagctccct 180
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgg 36
||||||||||||||| ||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgg 36
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
||||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctccct 182
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 aagagagctttcttcggtccactcatgga 37
|||||||||| |||| |||||||||||||
Sbjct: 9 aagagagcttccttcagtccactcatgga 37
>40703_mtr-MIR319:mirbase
Length = 207
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
||||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctccct 189
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 gaagagagctttcttcggtccactcatgga 37
||||||||||| |||| |||||||||||||
Sbjct: 17 gaagagagcttccttcagtccactcatgga 46
>41185_aqc-MIR319:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctcccta 182
|||||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcccta 176
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccct 181
||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccct 183
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctcc 179
||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctcc 179
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccct 181
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>39740_smo-MIR319:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccct 181
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 gcttggactgaagggagctcc 179
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>40466_gma-MIR319c:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 151 ttctctatgcttggactgaagggagctcc 179
|||||| ||||||||||||| ||||||||
Sbjct: 173 ttctctgtgcttggactgaaaggagctcc 201
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccc 180
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccc 180
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctccc 180
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>42783_zma-MIR319d:mirbase
Length = 212
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
|||||||||||||||| |||||||
Sbjct: 171 tgcttggactgaagggtgctccct 194
>42781_zma-MIR319b:mirbase
Length = 213
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
|||||||||||||||| |||||||
Sbjct: 172 tgcttggactgaagggtgctccct 195
>42563_sbi-MIR319:mirbase
Length = 249
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
|||||||||||||||| |||||||
Sbjct: 188 tgcttggactgaagggtgctccct 211
>41995_osa-MIR319b:mirbase
Length = 197
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggagctccct 181
|||||||||||||||| |||||||
Sbjct: 165 tgcttggactgaagggtgctccct 188
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggagctccc 180
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctcc 179
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctcc 179
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 cttggactgaagggagctcc 179
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
