miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26803_cfa-mir-331:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>27845_mml-mir-331:mirbase
Length = 94
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>27846_mml-mir-331:mirbase
Length = 94
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>28582_hsa-mir-331:mirbase
Length = 94
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>28583_hsa-mir-331:mirbase
Length = 94
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>30331_ptr-mir-331:mirbase
Length = 93
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
Query: 62 cccctgggcctatcctagaaccaacctaa 90
|||||||||||||||||||||||||||||
Sbjct: 61 cccctgggcctatcctagaaccaacctaa 89
>27127_eca-mir-331:mirbase
Length = 92
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 4 tttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcc 63
Query: 64 cctgggcctatcctagaaccaacctaa 90
|||||||||||||||||||||||||||
Sbjct: 64 cctgggcctatcctagaaccaacctaa 90
>31998_mmu-mir-331:mirbase
Length = 96
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtctggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>31999_mmu-mir-331:mirbase
Length = 96
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtctggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>32852_rno-mir-331:mirbase
Length = 96
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtctggtcttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatcctagaaccaacctaa 90
||||||||||||||||||||||||||||||
Sbjct: 61 gcccctgggcctatcctagaaccaacctaa 90
>34058_ssc-mir-331:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 11 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 60
Query: 71 ctatcctagaaccaacctaa 90
||||||||||||||||||||
Sbjct: 61 ctatcctagaaccaacctaa 80
>34059_ssc-mir-331:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 11 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 60
Query: 71 ctatcctagaaccaacctaa 90
||||||||||||||||||||
Sbjct: 61 ctatcctagaaccaacctaa 80
>30950_ppy-mir-331:mirbase
Length = 88
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatccta 78
||||||||||||||||||
Sbjct: 61 gcccctgggcctatccta 78
>30951_ppy-mir-331:mirbase
Length = 88
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccag 60
Query: 61 gcccctgggcctatccta 78
||||||||||||||||||
Sbjct: 61 gcccctgggcctatccta 78
