miRNEST 2.0, an integrative microRNA resource :: BLAST
>27135_eca-mir-342:mirbase
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgc 77
Query: 78 acccatctcctcggccc 94
|||| || ||| |||||
Sbjct: 78 acccgtcaccttggccc 94
>27136_eca-mir-342:mirbase
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgc 77
Query: 78 acccatctcctcggccc 94
|||| || ||| |||||
Sbjct: 78 acccgtcaccttggccc 94
>30337_ptr-mir-342:mirbase
Length = 98
Score = 71.9 bits (36), Expect = 8e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| ||| |||| || |||||||||||||||||||
Sbjct: 17 gaggggtgctatctgtgattgagggacatggctaatggaattgtctcacacagaaatcgc 76
Query: 78 accc 81
||||
Sbjct: 77 accc 80
>26807_cfa-mir-342:mirbase
Length = 63
Score = 65.9 bits (33), Expect = 5e-12
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 22 gggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgcacc 80
|||||||||||||| |||||| ||| ||||||| || ||||||||||||||||||||||
Sbjct: 1 gggtgctatctgtgattgagggacatggcaaatagaattgtctcacacagaaatcgcacc 60
Query: 81 c 81
|
Sbjct: 61 c 61
>27855_mml-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>27856_mml-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>28592_hsa-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>28593_hsa-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>30959_ppy-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>30960_ppy-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggttaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>32011_mmu-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggtcaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>32012_mmu-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggtcaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>32862_rno-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggtcaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>32863_rno-mir-342:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 19 gaggggtgctatctgtggttgagg-acacggcaaatgaaactgtctcacacagaaatcgc 77
||||||||||||||||| |||||| ||| || |||| || |||||||||||||||||||
Sbjct: 18 gaggggtgctatctgtgattgagggacatggtcaatggaattgtctcacacagaaatcgc 77
Query: 78 accc 81
||||
Sbjct: 78 accc 81
>34065_ssc-mir-342:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 aactgtctcacacagaaatcgcaccc 81
||||||||||||||||||||||||||
Sbjct: 43 aactgtctcacacagaaatcgcaccc 68
