miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33335_bta-mir-362:mirbase
Length = 65
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>34070_ssc-mir-362:mirbase
Length = 79
Score = 113 bits (57), Expect = 1e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 5 aatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattcaa 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11 aatccttggaacctaggtgtgagtgctgctctagtgcaacacacctattcaaggattcaa 70
Query: 65 a 65
|
Sbjct: 71 a 71
>27861_mml-mir-362:mirbase
Length = 65
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>27862_mml-mir-362:mirbase
Length = 65
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>28598_hsa-mir-362:mirbase
Length = 65
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>28599_hsa-mir-362:mirbase
Length = 65
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>30341_ptr-mir-362:mirbase
Length = 64
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 3 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 62
Query: 64 aa 65
||
Sbjct: 63 aa 64
>30966_ppy-mir-362:mirbase
Length = 62
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>30965_ppy-mir-362:mirbase
Length = 62
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>27143_eca-mir-362:mirbase
Length = 66
Score = 97.6 bits (49), Expect = 9e-22
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 2 ctcgaatccttggaacctaggtgtgagtgccatttcagtgcaacacacctattcaaggat 61
Query: 61 tcaaa 65
|||||
Sbjct: 62 tcaaa 66
>27144_eca-mir-362:mirbase
Length = 66
Score = 97.6 bits (49), Expect = 9e-22
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 2 ctcgaatccttggaacctaggtgtgagtgccatttcagtgcaacacacctattcaaggat 61
Query: 61 tcaaa 65
|||||
Sbjct: 62 tcaaa 66
>26812_cfa-mir-362:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 5e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcggtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>32032_mmu-mir-362:mirbase
Length = 65
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
|||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>32033_mmu-mir-362:mirbase
Length = 65
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
|||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>32881_rno-mir-362:mirbase
Length = 65
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ctcgaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggat 60
|||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||
Sbjct: 1 ctcgaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
