miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33338_bta-mir-365:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 60
Query: 62 ccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatg 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 accgcagggaaaatgagggacttttgggggcagatgtgtttccattccgctatcataatg 60
Query: 61 cccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||
Sbjct: 61 cccctaaaaatccttattgctcttgca 87
>27445_mdo-mir-365:mirbase
Length = 87
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
Query: 62 ccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcc 62
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
Query: 63 cctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||
Sbjct: 61 cctaaaaatccttattgctcttgca 85
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcc 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 60
Query: 63 cctaaaaatccttattgctc 82
||||||||||||||||||||
Sbjct: 61 cctaaaaatccttattgctc 80
>31549_oan-mir-365:mirbase
Length = 83
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 4 gcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgccc 63
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 gcagggaaaatgagggacttttgggggcagatgtgtttccattgcactatcataatgccc 60
Query: 64 ctaaaaatccttattgctcttgc 86
|||||||||||||||||||||||
Sbjct: 61 ctaaaaatccttattgctcttgc 83
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 16 agggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaaatcctt 75
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
Query: 76 attgctcttgca 87
||||||||||||
Sbjct: 61 attgctcttgca 72
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 123 bits (62), Expect = 2e-29
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgc 60
Query: 62 ccctaaaaatccttattgctcttgca 87
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
||||||||| |||||||| |||||||||||| ||||||| || ||| ||||||||||
Sbjct: 1 ccgcagggagaatgaggggcttttgggggcacttgtgtttcagtttcaccatcataatgc 60
Query: 62 ccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 10 aaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaa 69
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
Query: 70 atccttattgctcttgca 87
||||||||||||||||||
Sbjct: 72 atccttattgctcttgca 89
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>34650_fru-mir-365:mirbase
Length = 95
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 54 tcataatgcccctaaaaatccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 78 tcataatgcccctaaaaatccttattgttcttgca 112
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>32883_rno-mir-365:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgttcttgca 86
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 44 tcataatgcccctaaaaatccttattgttcttgca 78
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttattgctcttgca 87
||||||||||||||||||||||||||| |||||||
Sbjct: 44 tcataatgcccctaaaaatccttattgttcttgca 78
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 taatgcccctaaaaatccttattgctcttgca 87
|||||||||||||||||||||||| |||||||
Sbjct: 68 taatgcccctaaaaatccttattgttcttgca 99
>27146_eca-mir-365:mirbase
Length = 66
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 tcataatgcccctaaaaatccttatt 78
||||||||||||||||||||||||||
Sbjct: 41 tcataatgcccctaaaaatccttatt 66
