miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26816_cfa-mir-367:mirbase
Length = 68
Score = 119 bits (60), Expect = 2e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 ccattactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaat 60
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ccatgactgttgctaatatgcaactctgttcaatacaaattggaattgcactttagcaat 60
Query: 61 ggtgatgg 68
||||||||
Sbjct: 61 ggtgatgg 68
>28603_hsa-mir-367:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 ccattactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaat 60
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 ccattactgttgctaatatgcaactctgttgaatataaattggaattgcactttagcaat 60
Query: 61 ggtgatgg 68
||||||||
Sbjct: 61 ggtgatgg 68
>30970_ppy-mir-367:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 ccattactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaat 60
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 ccattactgttgctaatatgcaactctgtttaatataaattggaattgcactttagcaat 60
Query: 61 ggtgatgg 68
||||||||
Sbjct: 61 ggtgatgg 68
>30344_ptr-mir-367:mirbase
Length = 67
Score = 109 bits (55), Expect = 2e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 1 ccattactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaat 60
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 ccattactgttgctaatatgcaactctgttgaatataaattggaattgcactttagcaat 60
Query: 61 ggtgatg 67
|||||||
Sbjct: 61 ggtgatg 67
>27148_eca-mir-367:mirbase
Length = 68
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 ccattactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaat 60
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 ccatcactgttgctaatatgcaactctgttcaatacaaactggaattgcactttagcaat 60
Query: 61 ggtga 65
|||||
Sbjct: 61 ggtga 65
>27866_mml-mir-367:mirbase
Length = 68
Score = 103 bits (52), Expect = 1e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 tactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaatggtg 64
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 5 tactgttgctaatatgcaactctgttgaacacaaattggaattgcactttagcaatggtg 64
Query: 65 atgg 68
||||
Sbjct: 65 atgg 68
>32038_mmu-mir-367:mirbase
Length = 75
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 6 actgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaatggtga 65
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
Query: 66 tgg 68
|||
Sbjct: 69 tgg 71
>26023_gga-mir-367:mirbase
Length = 73
Score = 87.7 bits (44), Expect = 9e-19
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 5 tactgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaatggtg 64
|||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 8 tactgttgctaacatgcaactctgttgtataaaaattggaattgcactttagcaatggtg 67
Query: 65 atgg 68
||||
Sbjct: 68 atgg 71
>27446_mdo-mir-367:mirbase
Length = 63
Score = 77.8 bits (39), Expect = 8e-16
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 6 actgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaatggtga 65
||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 1 actgttgctaacatgcaactctgttctatgtaaacgggaattgcactttagcaatggtga 60
Query: 66 tgg 68
|||
Sbjct: 61 tgg 63
>25852_xtr-mir-367:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 43 gaattgcactttagcaatggtga 65
|||||||||| ||||||||||||
Sbjct: 41 gaattgcactgtagcaatggtga 63
