miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27867_mml-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>27868_mml-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>28604_hsa-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>28605_hsa-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>30345_ptr-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 61 ttttctcag 69
|||||||||
Sbjct: 61 ttttctcag 69
>30971_ppy-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>30972_ppy-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctcag 69
|||||||||
Sbjct: 62 ttttctcag 70
>33342_bta-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 61 ttttctcag 69
|||||||||
Sbjct: 61 ttttctcag 69
>33813_oar-mir-369:mirbase
Length = 107
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
Query: 61 ttttctcag 69
|||||||||
Sbjct: 79 ttttctcag 87
>33814_oar-mir-369:mirbase
Length = 107
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
Query: 61 ttttctcag 69
|||||||||
Sbjct: 79 ttttctcag 87
>27150_eca-mir-369:mirbase
Length = 70
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctc 67
|||||||
Sbjct: 62 ttttctc 68
>27149_eca-mir-369:mirbase
Length = 70
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgatc 61
Query: 61 ttttctc 67
|||||||
Sbjct: 62 ttttctc 68
>32039_mmu-mir-369:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgatc 66
Query: 61 ttttctcag 69
|||||||||
Sbjct: 67 ttttctcag 75
>32040_mmu-mir-369:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgatc 66
Query: 61 ttttctcag 69
|||||||||
Sbjct: 67 ttttctcag 75
>32884_rno-mir-369:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgatc 66
Query: 61 ttttctcag 69
|||||||||
Sbjct: 67 ttttctcag 75
>32885_rno-mir-369:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 tgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgatc 66
Query: 61 ttttctcag 69
|||||||||
Sbjct: 67 ttttctcag 75
>33072_rno-mir-3578:mirbase
Length = 117
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 90 tgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgatc 31
Query: 61 ttttctcag 69
|||||||||
Sbjct: 30 ttttctcag 22
>34075_ssc-mir-369:mirbase
Length = 149
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42 tgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgatc 101
Query: 61 ttttctcag 69
|||||||||
Sbjct: 102 ttttctcag 110
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 35 tgacttcgaataatacatggttgatcttttctcag 69
|||||||||||||||||||||||||||||||||||
Sbjct: 115 tgacttcgaataatacatggttgatcttttctcag 149
Score = 67.9 bits (34), Expect = 8e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 tgaagggagatcgaccgtgttatattcgctttat 34
||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttat 35
>26817_cfa-mir-369:mirbase
Length = 56
Score = 97.6 bits (49), Expect = 9e-22
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 11 tcgaccgtgttatattcgctttattgacttcgaataatacatggttgatcttt 63
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 tcgaccgtgttatattcgctttattgacttcgaataatacatggttggtcttt 56
