miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28606_hsa-mir-370:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>30346_ptr-mir-370:mirbase
Length = 74
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 62
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 63 cctggtctgtct 74
>30973_ppy-mir-370:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>33815_oar-mir-370:mirbase
Length = 107
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 aggcagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14 aggcagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtg 73
Query: 61 gaacctggtctgtct 75
||||||||| |||||
Sbjct: 74 gaacctggtatgtct 88
>33816_oar-mir-370:mirbase
Length = 107
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 aggcagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14 aggcagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtg 73
Query: 61 gaacctggtctgtct 75
||||||||| |||||
Sbjct: 74 gaacctggtatgtct 88
>27869_mml-mir-370:mirbase
Length = 75
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>26818_cfa-mir-370:mirbase
Length = 79
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
|||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 4 cagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>27151_eca-mir-370:mirbase
Length = 75
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
|||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 4 cagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>32041_mmu-mir-370:mirbase
Length = 79
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaacctggtct 71
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
>32886_rno-mir-370:mirbase
Length = 79
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaacctggtct 71
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
