miRNEST 2.0, an integrative microRNA resource :: BLAST
>27160_eca-mir-378:mirbase
Length = 66
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
Query: 61 aggcct 66
||||||
Sbjct: 61 aggcct 66
>27884_mml-mir-378:mirbase
Length = 66
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
Query: 61 aggcct 66
||||||
Sbjct: 61 aggcct 66
>32049_mmu-mir-378:mirbase
Length = 66
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
Query: 61 aggcct 66
||||||
Sbjct: 61 aggcct 66
>33046_rno-mir-3557:mirbase
Length = 113
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Minus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 29
Query: 61 aggcct 66
||||||
Sbjct: 28 aggcct 23
>33047_rno-mir-3557:mirbase
Length = 113
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Minus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 29
Query: 61 aggcct 66
||||||
Sbjct: 28 aggcct 23
>32894_rno-mir-378:mirbase
Length = 65
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 2 gggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcagaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcagaa 60
Query: 62 ggcct 66
|||||
Sbjct: 61 ggcct 65
>28622_hsa-mir-378:mirbase
Length = 66
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 agggctcctgactccaggtcctgtgtgttacctagaaatagcactggacttggagtcaga 60
Query: 61 aggcct 66
||||||
Sbjct: 61 aggcct 66
>30358_ptr-mir-378:mirbase
Length = 65
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 2 gggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcagaa 61
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gggctcctgactccaggtcctgtgtgttacctagaaatagcactggacttggagtcagaa 60
Query: 62 ggcct 66
|||||
Sbjct: 61 ggcct 65
>26829_cfa-mir-378:mirbase
Length = 60
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 5 ctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcagaaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcagaaggc 60
>34082_ssc-mir-378-1:mirbase
Length = 80
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 7 agggctcctgactccaggtcctgtgtgttgcctggaaatagcactggacttggagtcaga 66
Query: 61 aggcct 66
||||||
Sbjct: 67 aggcct 72
>30985_ppy-mir-378:mirbase
Length = 63
Score = 103 bits (52), Expect = 1e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 agggctcctgactccaggtcctgtgtgttacctcgaaatagcactggacttggagtcaga 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1 agggctcctgactccaggtcctgtgtgttacctagaaatagcactggacttgga-tcaga 59
Query: 61 aggc 64
||||
Sbjct: 60 aggc 63
>34083_ssc-mir-378-2:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaaggcc 65
||||||||||||||||||||||||||
Sbjct: 41 agcactggacttggagtcagaaggcc 66
>33354_bta-mir-378-2:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaaggc 64
|||||||||||||||||||||||||
Sbjct: 5 agcactggacttggagtcagaaggc 29
>28624_hsa-mir-378c:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 cactggacttggagtcagaag 62
|||||||||||||||||||||
Sbjct: 10 cactggacttggagtcagaag 30
>28626_hsa-mir-378d-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 cactggacttggagtcagaa 61
||||||||||||||||||||
Sbjct: 21 cactggacttggagtcagaa 40
>28631_hsa-mir-378i:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaagg 63
||||||||||| ||||||||||||
Sbjct: 4 agcactggactaggagtcagaagg 27
>28623_hsa-mir-378b:mirbase
Length = 57
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 35 gaaatagcactggacttggagtcagaa 61
|||| |||||||||||||||| |||||
Sbjct: 26 gaaagagcactggacttggaggcagaa 52
>28625_hsa-mir-378d-1:mirbase
Length = 54
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 actggacttggagtcagaa 61
|||||||||||||||||||
Sbjct: 31 actggacttggagtcagaa 49
>28628_hsa-mir-378f:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaag 62
|||||||||||||||| ||||||
Sbjct: 49 agcactggacttggagccagaag 71
>28644_hsa-mir-422a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaaggcct 66
|||||||||||| | ||||||||||||
Sbjct: 7 agcactggacttagggtcagaaggcct 33
>30369_ptr-mir-422a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 40 agcactggacttggagtcagaaggcct 66
|||||||||||| | ||||||||||||
Sbjct: 7 agcactggacttagggtcagaaggcct 33
>32050_mmu-mir-378b:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 ctggacttggagtcagaag 62
|||||||||||||||||||
Sbjct: 67 ctggacttggagtcagaag 85
