miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32911_rno-mir-431:mirbase
Length = 114
Score = 190 bits (96), Expect = 2e-49
Identities = 102/104 (98%)
Strand = Plus / Plus
Query: 1 tcctgcgcgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tcctgcgcgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgt 60
Query: 61 tgcaggtcgtcttgcagggcttctcgcaagacgacatattcatc 104
||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tgcaggtcgtcttgcagggcttctcgcaagacgacatcttcatc 104
>27903_mml-mir-431:mirbase
Length = 114
Score = 172 bits (87), Expect = 4e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 68
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 69 gtcttgcagggcttctcgcaagacgacatattcatcacc 107
||||||||||||||||||||||||||||| ||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatcctcatcacc 107
>28650_hsa-mir-431:mirbase
Length = 114
Score = 172 bits (87), Expect = 4e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 68
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 69 gtcttgcagggcttctcgcaagacgacatattcatcacc 107
||||||||||||||||||||||||||||| ||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatcctcatcacc 107
>30373_ptr-mir-431:mirbase
Length = 113
Score = 172 bits (87), Expect = 4e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 68
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 67
Query: 69 gtcttgcagggcttctcgcaagacgacatattcatcacc 107
||||||||||||||||||||||||||||| ||||||||
Sbjct: 68 gtcttgcagggcttctcgcaagacgacatcctcatcacc 106
>31004_ppy-mir-431:mirbase
Length = 114
Score = 172 bits (87), Expect = 4e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 68
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 69 gtcttgcagggcttctcgcaagacgacatattcatcacc 107
||||||||||||||||||||||||||||| ||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatcctcatcacc 107
>32070_mmu-mir-431:mirbase
Length = 91
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 8 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 67
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
Query: 68 cgtcttgcagggcttctcgcaagacgacat 97
||||||||||||||||||||||||||||||
Sbjct: 61 cgtcttgcagggcttctcgcaagacgacat 90
>27177_eca-mir-431:mirbase
Length = 89
Score = 168 bits (85), Expect = 6e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 8 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 67
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
Query: 68 cgtcttgcagggcttctcgcaagacgaca 96
|||||||||||||||||||||||||||||
Sbjct: 61 cgtcttgcagggcttctcgcaagacgaca 89
>33846_oar-mir-431:mirbase
Length = 91
Score = 168 bits (85), Expect = 6e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 8 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60
Query: 68 cgtcttgcagggcttctcgcaagacgaca 96
||||||||||||| |||||||||||||||
Sbjct: 61 cgtcttgcagggcgtctcgcaagacgaca 89
