miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34102_ssc-mir-451:mirbase
Length = 65
Score = 119 bits (60), Expect = 3e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 4 ggggtggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctg 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggggtggcgagcaaaccgttaccattactgagtttagtaatggtaacggttctcttgctg 61
Query: 64 cacc 67
||||
Sbjct: 62 cacc 65
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aaccgttaccattactgagtttagtaatggtaacggtt 54
|||||||||||||||| | | ||||||||||||||||
Sbjct: 52 aaccgttaccattactaaactcagtaatggtaacggtt 15
>32084_mmu-mir-451:mirbase
Length = 72
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgctcc 68
Query: 68 ca 69
||
Sbjct: 69 ca 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aaccgttaccattactgagtttagtaatggtaacggtt 54
|||||||||||||||| | | ||||||||||||||||
Sbjct: 55 aaccgttaccattactaaactcagtaatggtaacggtt 18
>26850_cfa-mir-451:mirbase
Length = 69
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctgtacc 67
Query: 68 ca 69
||
Sbjct: 68 ca 69
>32919_rno-mir-451:mirbase
Length = 72
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctgctcc 68
Query: 68 ca 69
||
Sbjct: 69 ca 70
>27185_eca-mir-451:mirbase
Length = 72
Score = 105 bits (53), Expect = 4e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 11 cgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacccag 70
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 12 cgaggaaaccgttaccattactgtgtttagtaatggtaacggttctcttgctgtacccag 71
Query: 71 a 71
|
Sbjct: 72 a 72
>31556_oan-mir-451:mirbase
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctggctg 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aaccgttaccattactgagtttagtaatggtaacggtt 54
|||||||||||||||| | | ||||||||||||||||
Sbjct: 62 aaccgttaccattactaaactcagtaatggtaacggtt 25
>28661_hsa-mir-451:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctatacc 68
Query: 68 caga 71
||||
Sbjct: 69 caga 72
>30382_ptr-mir-451:mirbase
Length = 71
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 8 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctatacc 67
Query: 68 caga 71
||||
Sbjct: 68 caga 71
>31014_ppy-mir-451:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctatacc 68
Query: 68 caga 71
||||
Sbjct: 69 caga 72
>27913_mml-mir-451:mirbase
Length = 72
Score = 93.7 bits (47), Expect = 2e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgct 62
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaagggttctcttgct 63
>28662_hsa-mir-451b:mirbase
Length = 68
Score = 93.7 bits (47), Expect = 2e-20
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgct 62
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 62 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgct 8
>26532_tgu-mir-451:mirbase
Length = 73
Score = 87.7 bits (44), Expect = 9e-19
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 9 ggcgaggaaaccgttaccattactgagtttagtaatggtaacggttct 56
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aaccgttaccattactgagtttagtaatggtaacggtt 54
|||||||||||||||| | | ||||||||||||||||
Sbjct: 49 aaccgttaccattactaaactcagtaatggtaacggtt 12
>26030_gga-mir-451:mirbase
Length = 69
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 14 ggaaaccgttaccattactgagtttagtaatggtaacggttct 56
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 ggaaaccgttaccattactgagtttagtaatggtaacggttct 58
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aaccgttaccattactgagtttagtaatggtaacggtt 54
|||||||||||||||| | | ||||||||||||||||
Sbjct: 56 aaccgttaccattactaaactcagtaatggtaacggtt 19
>25862_xtr-mir-451:mirbase
Length = 62
Score = 83.8 bits (42), Expect = 1e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 15 gaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgc 64
||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 11 gaaaccgttaccattactgagtttagtaatggtaagggttctgttgctgc 60
>27452_mdo-mir-451:mirbase
Length = 62
Score = 75.8 bits (38), Expect = 4e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctc 57
||||| |||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 2 tggcggggaaaccgttaccattactgtgtttagtaatggtaagggttctc 51
>34473_dre-mir-451:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 15 gaaaccgttaccattactgagtttagtaatggtaacggttct 56
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 gaaaccgttaccattactgagtttagtaatggtaagggttct 51
>25551_pma-mir-451:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 taatggtaacggttctcttgctgc 64
||||||||| ||||||||||||||
Sbjct: 43 taatggtaagggttctcttgctgc 66
