miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34104_ssc-mir-484:mirbase
Length = 83
Score = 91.7 bits (46), Expect = 5e-20
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaatagggaccttcccggggggc 54
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 10 gtcaggctcagtcccctcccgataaacccctaaatagggaccttcccagggggc 63
>27919_mml-mir-484:mirbase
Length = 63
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaatagggaccttcccgggggg 53
|||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 1 gtcaggctcagtcccctcccgataaacccctaaatagggactttcccgggggg 53
>28670_hsa-mir-484:mirbase
Length = 79
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaatagggaccttcccgggggg 53
|||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 7 gtcaggctcagtcccctcccgataaacccctaaatagggactttcccgggggg 59
>30387_ptr-mir-484:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaatagggaccttcccgggggg 53
|||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 6 gtcaggctcagtcccctcccgataaacccctaaatagggactttcccgggggg 58
>31019_ppy-mir-484:mirbase
Length = 79
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaatagggaccttcccgggggg 53
|||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 7 gtcaggctcagtcccctcccgataaacccctaaatagggactttcccgggggg 59
>32173_mmu-mir-484:mirbase
Length = 67
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctctaaataggg 39
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 gtcaggctcagtcccctcccgataaacctcaaaataggg 42
>32929_rno-mir-484:mirbase
Length = 77
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 gtcaggctcagtcccctcccgataaacctc 30
||||||||||||||||||||||||||||||
Sbjct: 45 gtcaggctcagtcccctcccgataaacctc 74
