miRNEST 2.0, an integrative microRNA resource :: BLAST
>27205_eca-mir-495:mirbase
Length = 82
Score = 107 bits (54), Expect = 1e-24
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tggtgcctggaaagaagttgcccatgttcttttcgct-gatatgtgacgaaacaaacatg 59
|||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
Query: 60 gtgcacttcttttccggcatca 81
||||||||||||| ||| ||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>27935_mml-mir-495:mirbase
Length = 82
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tggtgcctggaaagaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatg 59
|||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
Query: 60 gtgcacttcttttccggcatca 81
||||||||||||| ||| ||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>28686_hsa-mir-495:mirbase
Length = 82
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tggtgcctggaaagaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatg 59
|||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
Query: 60 gtgcacttcttttccggcatca 81
||||||||||||| ||| ||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>30398_ptr-mir-495:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 6 cctggaaagaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatggtgca 64
|||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 5 cctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgca 64
Query: 65 cttcttttccggcatca 81
|||||||| ||| ||||
Sbjct: 65 cttctttttcggtatca 81
>31034_ppy-mir-495:mirbase
Length = 79
Score = 97.6 bits (49), Expect = 1e-21
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 6 cctggaaagaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatggtgca 64
|||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 3 cctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgca 62
Query: 65 cttcttttccggcatca 81
|||||||| ||| ||||
Sbjct: 63 cttctttttcggtatca 79
>33860_oar-mir-495:mirbase
Length = 126
Score = 83.8 bits (42), Expect = 2e-17
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 12 aagaagttgcccatgttcttttcgct-gatatgtgacgaaacaaacatggtgcacttctt 70
||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 41 aagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatggtgcacttctt 100
Query: 71 tt 72
||
Sbjct: 101 tt 102
>33861_oar-mir-495:mirbase
Length = 126
Score = 83.8 bits (42), Expect = 2e-17
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 12 aagaagttgcccatgttcttttcgct-gatatgtgacgaaacaaacatggtgcacttctt 70
||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 41 aagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatggtgcacttctt 100
Query: 71 tt 72
||
Sbjct: 101 tt 102
>32937_rno-mir-495:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 6 cctggaaagaagttgcccatgttctttt-cgctgatat--gtgacgaaacaaacatggtg 62
|||| |||||||||||||||||| |||| |||| ||| ||||||||||||||||||||
Sbjct: 3 cctgaaaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatggtg 62
Query: 63 cacttctttt 72
||||||||||
Sbjct: 63 cacttctttt 72
>26864_cfa-mir-495:mirbase
Length = 58
Score = 67.9 bits (34), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 14 gaagttgcccatgttcttttcgct-gatatgtgacgaaacaaacatggtgcacttctt 70
|||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||||
Sbjct: 1 gaagttgcccgtgttattttcgcttgatacgtgccgaaacaaacatggtgcacttctt 58
>32184_mmu-mir-495:mirbase
Length = 63
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 11 aaagaagttgcccatgttctttt-cgctgatat--gtgacgaaacaaacatggtgcactt 67
|||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||
Sbjct: 1 aaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatggtgcactt 60
Query: 68 ctt 70
|||
Sbjct: 61 ctt 63
>27229_eca-mir-543:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgc-tgatatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| |||| ||||||| | || |||||||||||| | |||||||||||||
Sbjct: 8 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 67
Query: 72 t 72
|
Sbjct: 68 t 68
>28791_hsa-mir-543:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgc-tgatatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| |||| ||||||| | || |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 72 t 72
|
Sbjct: 70 t 70
>31130_ppy-mir-543:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgc-tgatatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| |||| ||||||| | || |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 72 t 72
|
Sbjct: 70 t 70
>33414_bta-mir-543:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 71
Query: 72 t 72
|
Sbjct: 72 t 72
>33868_oar-mir-543:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 72 t 72
|
Sbjct: 100 t 100
>33869_oar-mir-543:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatggtgcacttcttt 71
||||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 72 t 72
|
Sbjct: 100 t 100
>30467_ptr-mir-543:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 50/59 (84%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttcttttcgc-tgatatgtgacgaaacaaacatggtgcacttctt 70
||||||||||| |||| ||||||| | || |||||||||||| | ||||||||||||
Sbjct: 9 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttctt 67
