miRNEST 2.0, an integrative microRNA resource :: BLAST
>33111_bta-let-7b:mirbase
Length = 81
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>28342_hsa-let-7b:mirbase
Length = 83
Score = 131 bits (66), Expect = 8e-32
Identities = 76/78 (97%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 80 ggaaggcagtaggttgtatagttatcttccgagggg-caacatcactgccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>27632_mml-let-7b:mirbase
Length = 83
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 80 ggaaggcagtaggttgtatagttatcttctgagggg-caacatcactgccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>30129_ptr-let-7b:mirbase
Length = 82
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 79 ggaaggcagtaggttgtatagttatcttctgagggg-caacatcactgccctgaaaccac 21
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 20 acaacctactacctcacc 3
>30734_ppy-let-7b:mirbase
Length = 83
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 80 ggaaggcagtaggttgtatagttatcttctgagggg-caacatcactgccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>31754_mmu-let-7b:mirbase
Length = 85
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 81 ggaaggcagtaggttgtatagttatcttcggagggg-caacatcactgccctgaaaccac 23
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 22 acaacctactacctcacc 5
>27321_mdo-let-7b:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 75/79 (94%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgag-ggggcaacatcactaccctgaaacca 64
||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 84 ggaaggcagtaggttgtatagttatcttctgattggggcaaaatcactaccctgaaacca 25
Query: 65 cacaacctactacctcacc 83
|||||||||||||||||||
Sbjct: 24 cacaacctactacctcacc 6
>32640_rno-let-7b:mirbase
Length = 85
Score = 115 bits (58), Expect = 5e-27
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||
Sbjct: 81 ggaaggcagtaggttgtatagttatcttcggagggg-cgacatcactgccctgaaaccac 23
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 22 acaacctactacctcacc 5
>34528_fru-let-7b:mirbase
Length = 84
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
|||||||||||||||||||||||| || | || ||||||| ||||| |||||||||||||
Sbjct: 81 ggaaggcagtaggttgtatagttagctcctgatggggcaaaatcacaaccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>34676_tni-let-7b:mirbase
Length = 84
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
|||||||||||||||||||||||| || | || ||||||| ||||| |||||||||||||
Sbjct: 81 ggaaggcagtaggttgtatagttagctcctgatggggcaaaatcacaaccctgaaaccac 22
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 21 acaacctactacctcacc 4
>25871_gga-let-7b:mirbase
Length = 85
Score = 105 bits (53), Expect = 5e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgag-ggggcaacatcactaccctgaaacca 64
||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||
Sbjct: 82 ggaaggcagtaggttgtatagttatctcctgattggggcaaaatcactaccctgaaacca 23
Query: 65 cacaacctactacctca 81
|||||||||||||||||
Sbjct: 22 cacaacctactacctca 6
>26379_tgu-let-7b:mirbase
Length = 92
Score = 105 bits (53), Expect = 5e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgag-ggggcaacatcactaccctgaaacca 64
||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||
Sbjct: 87 ggaaggcagtaggttgtatagttatctcctgattggggcaaaatcactaccctgaaacca 28
Query: 65 cacaacctactacctca 81
|||||||||||||||||
Sbjct: 27 cacaacctactacctca 11
>34171_dre-let-7b:mirbase
Length = 94
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgagggggcaacatcactaccctgaaaccac 65
|||||||||||||||||||||||| || | || ||||||| | ||| |||||||||||||
Sbjct: 86 ggaaggcagtaggttgtatagttaactcctgatggggcaaaaacacaaccctgaaaccac 27
Query: 66 acaacctactacctcacc 83
||||||||||||||||||
Sbjct: 26 acaacctactacctcacc 9
>31410_oan-let-7b:mirbase
Length = 82
Score = 97.6 bits (49), Expect = 1e-21
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttccgag-ggggcaacatcactaccctgaaacca 64
||||||||||||| ||||||||||||||| || ||||||| |||||| |||||||||||
Sbjct: 81 ggaaggcagtaggctgtatagttatcttctgattggggcaaaatcactcccctgaaacca 22
Query: 65 cacaacctactacctca 81
|||||||||||||||||
Sbjct: 21 cacaacctactacctca 5
>26607_cfa-let-7b:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 54 ccctgaaaccacacaacctactacctcacc 83
||||||||||||||||||||||||||||||
Sbjct: 67 ccctgaaaccacacaacctactacctcacc 38
>34532_fru-let-7h:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 aggaaggcagtaggttgtatagttatct 32
|||||||||||| |||||||||||||||
Sbjct: 84 aggaaggcagtaagttgtatagttatct 57
>34680_tni-let-7h:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 aggaaggcagtaggttgtatagttatct 32
|||||||||||| |||||||||||||||
Sbjct: 99 aggaaggcagtaagttgtatagttatct 72
>25409_pma-let-7a-2:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctca 81
|||||||||| | ||||||||||||||||
Sbjct: 45 accctgaaactatacaacctactacctca 17
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctcacc 83
|||||| ||||||||||||||||||
Sbjct: 36 aaaccatacaacctactacctcacc 12
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctcacc 83
|||||| ||||||||||||||||||
Sbjct: 36 aaaccatacaacctactacctcacc 12
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 cagtaggttgtatagttatct 32
|||||||||||||||||||||
Sbjct: 75 cagtaggttgtatagttatct 55
>34178_dre-let-7f:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatcttc 34
|||||||| ||| ||||||||||||||||
Sbjct: 96 ggaaggcaatagattgtatagttatcttc 68
>34173_dre-let-7c-2:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 58 gaaaccacacaacctactacctca 81
||||||| ||||||||||||||||
Sbjct: 38 gaaaccatacaacctactacctca 15
>25413_pma-let-7c:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctcacc 83
||||| |||||| |||| |||||||||||||
Sbjct: 42 accctaaaaccatacaatctactacctcacc 12
>25678_xtr-let-7c:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 38 aaaccatacaacctactacctca 16
>25753_xtr-mir-98:mirbase
Length = 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
||||||||||| | |||||||||||||
Sbjct: 93 ggaaggcagtaagctgtatagttatct 67
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctcacc 83
||||| |||| | ||||||||||||||||||
Sbjct: 32 accctaaaactatacaacctactacctcacc 2
>25872_gga-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>25874_gga-let-7f:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>26380_tgu-let-7c-1:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>26381_tgu-let-7c-2:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>26384_tgu-let-7f:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 87 ggaaggcaatagattgtatagttatct 61
>26608_cfa-let-7c:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 23 aaaccatacaacctactacctca 1
>26610_cfa-let-7f:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 77 ggaaggcaatagattgtatagttatct 51
>26931_eca-let-7c:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 26 aaaccatacaacctactacctca 4
>26934_eca-let-7f:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>27633_mml-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>28343_hsa-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>30130_ptr-let-7c:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 32 aaaccatacaacctactacctca 10
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 82 ggaaggcaatagattgtatagttatct 56
>30735_ppy-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>31413_oan-let-7f-1:mirbase
Length = 149
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 107 ggaaggcaatagattgtatagttatct 81
>31755_mmu-let-7c-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 38 aaaccatacaacctactacctca 16
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 84 ggaaggcaatagattgtatagttatct 58
>32641_rno-let-7c-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 38 aaaccatacaacctactacctca 16
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 84 ggaaggcaatagattgtatagttatct 58
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 10 ggaaggcaatagattgtatagttatct 36
>33112_bta-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 33 aaaccatacaacctactacctca 11
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
|||||||| ||| ||||||||||||||
Sbjct: 83 ggaaggcaatagattgtatagttatct 57
>33900_ssc-let-7c:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 38 aaaccatacaacctactacctca 16
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctcacc 83
||||| |||| | ||||||||||||||||||
Sbjct: 46 accctcaaactatacaacctactacctcacc 16
>34172_dre-let-7c-1:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 aaaccacacaacctactacctca 81
|||||| ||||||||||||||||
Sbjct: 45 aaaccatacaacctactacctca 23
>34181_dre-let-7h:mirbase
Length = 114
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 6 ggaaggcagtaggttgtatagttatct 32
||||||||||| ||||||||||||||
Sbjct: 99 ggaaggcagtaaattgtatagttatct 73
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctcacc 83
||||| |||| | ||||||||||||||||||
Sbjct: 32 accctaaaactatacaacctactacctcacc 2
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 53 accctgaaaccacacaacctactacctcacc 83
||||| |||| | ||||||||||||||||||
Sbjct: 40 accctaaaactatacaacctactacctcacc 10
