miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28571_hsa-mir-323b:mirbase
Length = 82
Score = 121 bits (61), Expect = 1e-28
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 19 ggtacttggagggaggttgtccgtggtgagtttgcattgtctaatgatgcccaatacacg 78
|||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||
Sbjct: 2 ggtactcggagggaggttgtccgtggtgagttcgcattatttaatgatgcccaatacacg 61
Query: 79 gtcgatctcttttcggtatca 99
||||| |||||||||||||||
Sbjct: 62 gtcgacctcttttcggtatca 82
>28572_hsa-mir-323b:mirbase
Length = 82
Score = 121 bits (61), Expect = 1e-28
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 19 ggtacttggagggaggttgtccgtggtgagtttgcattgtctaatgatgcccaatacacg 78
|||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||
Sbjct: 2 ggtactcggagggaggttgtccgtggtgagttcgcattatttaatgatgcccaatacacg 61
Query: 79 gtcgatctcttttcggtatca 99
||||| |||||||||||||||
Sbjct: 62 gtcgacctcttttcggtatca 82
>33385_bta-mir-453:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 6e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ccagcagtgctgcctcacggtacttggagggaggttgtccgtggtgagtttgcattgtct 60
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 13 ccagcagcactgcctcacggtacttggagggaggttgtccgtggtgagttcgcattattt 72
Query: 61 aatgatgc 68
||||||||
Sbjct: 73 aatgatgc 80
>27915_mml-mir-453:mirbase
Length = 80
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 3 agcagtgctgcctcacggtacttggagggaggttgtccgtggtgagtttgcattgtctaa 62
|||||||| ||||| |||||| ||||||||||||||||||||||||| ||||| | |||
Sbjct: 15 agcagtgccacctcatggtactcggagggaggttgtccgtggtgagttcgcattatttaa 74
Query: 63 tgatgc 68
||||||
Sbjct: 75 tgatgc 80
>30384_ptr-mir-453:mirbase
Length = 79
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 3 agcagtgctgcctcacggtacttggagggaggttgtccgtggtgagtttgcattgtctaa 62
|||||||| ||||| |||||| ||||||||||||||||||||||||| ||||| | |||
Sbjct: 14 agcagtgccacctcatggtactcggagggaggttgtccgtggtgagttcgcattatttaa 73
Query: 63 tgatgc 68
||||||
Sbjct: 74 tgatgc 79
>31016_ppy-mir-453:mirbase
Length = 80
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 3 agcagtgctgcctcacggtacttggagggaggttgtccgtggtgagtttgcattgtctaa 62
|||||||| ||||| |||||| ||||||||||||||||||||||||| ||||| | |||
Sbjct: 15 agcagtgccacctcatggtactcggagggaggttgtccgtggtgagttcgcattatttaa 74
Query: 63 tgatgc 68
||||||
Sbjct: 75 tgatgc 80
