miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33812_oar-mir-329b:mirbase
Length = 124
Score = 246 bits (124), Expect = 3e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1 cactggtgttctggtcagtgttcacccatggtacctgaagagaggttttctgggtttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactggtgttctggtcagtgttcacccatggtacctgaagagaggttttctgggtttctg 60
Query: 61 tttctttaatgaggatgaaacacacctggttaacctcttttccagtatcaaatcccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctttaatgaggatgaaacacacctggttaacctcttttccagtatcaaatcccatct 120
Query: 121 tgaa 124
||||
Sbjct: 121 tgaa 124
>33322_bta-mir-329b:mirbase
Length = 83
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 60
Query: 89 gttaacctcttttccagtatcaa 111
|||||||||||||||||||||||
Sbjct: 61 gttaacctcttttccagtatcaa 83
>26801_cfa-mir-329b:mirbase
Length = 80
Score = 159 bits (80), Expect = 6e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 60
Query: 90 ttaacctcttttccagtatc 109
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>30946_ppy-mir-329-1:mirbase
Length = 80
Score = 159 bits (80), Expect = 6e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 60
Query: 90 ttaacctcttttccagtatc 109
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>27841_mml-mir-329-1:mirbase
Length = 84
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tggtacctgaagggaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 61
Query: 89 gttaacctcttttccagtatcaa 111
|||||||||||||||||||||||
Sbjct: 62 gttaacctcttttccagtatcaa 84
>30947_ppy-mir-329-2:mirbase
Length = 83
Score = 155 bits (78), Expect = 9e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 tggtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctg 61
Query: 89 gttaacctcttttccagtatca 110
||||||||||||||||||||||
Sbjct: 62 gttaacctcttttccagtatca 83
>28578_hsa-mir-329-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
Query: 90 ttaacctcttttccagtatc 109
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>27125_eca-mir-329:mirbase
Length = 98
Score = 149 bits (75), Expect = 6e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12 tggtacctgaagagaggttttctgggtttctgtttctttaatgaagatgaaacacaccta 71
Query: 89 gttaacctcttttccagtatcaaatcc 115
|||||||||||||||||||||| ||||
Sbjct: 72 gttaacctcttttccagtatcagatcc 98
>28579_hsa-mir-329-2:mirbase
Length = 84
Score = 149 bits (75), Expect = 6e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 2 tggtacctgaagagaggttttctgggtttctgtttctttattgaggacgaaacacacctg 61
Query: 89 gttaacctcttttccagtatcaa 111
|||||||||||||||||||||||
Sbjct: 62 gttaacctcttttccagtatcaa 84
>30328_ptr-mir-329-1:mirbase
Length = 79
Score = 149 bits (75), Expect = 6e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 31 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 90
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
Query: 91 taacctcttttccagtatc 109
|||||||||||||||||||
Sbjct: 61 taacctcttttccagtatc 79
>30329_ptr-mir-329-2:mirbase
Length = 79
Score = 149 bits (75), Expect = 6e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 31 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 90
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctggt 60
Query: 91 taacctcttttccagtatc 109
|||||||||||||||||||
Sbjct: 61 taacctcttttccagtatc 79
>27842_mml-mir-329-2:mirbase
Length = 80
Score = 135 bits (68), Expect = 9e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 1 ggtacctgaagggaggttttctgggtctctgtttctttactgaggatgaaacacacctgg 60
Query: 90 ttaacctcttttccagtatc 109
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>33321_bta-mir-329a:mirbase
Length = 83
Score = 115 bits (58), Expect = 8e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||| ||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 2 tggtacttgaggagaggttttctaggtctctgtttctttcatgaggatgaaacacacctg 61
Query: 89 gttaacctcttttccagtatca 110
|||||||| |||||||||||||
Sbjct: 62 gttaaccttttttccagtatca 83
>33809_oar-mir-329a:mirbase
Length = 104
Score = 115 bits (58), Expect = 8e-27
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||| ||| |||||||||||| ||| || |||||||| ||||||||||||||||||||
Sbjct: 10 tggtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctg 69
Query: 89 gttaacctcttttccagtatcaaatcccatcttg 122
|||||||| ||||||||||||| |||||| ||||
Sbjct: 70 gttaaccttttttccagtatcagatcccaccttg 103
>33810_oar-mir-329a:mirbase
Length = 104
Score = 115 bits (58), Expect = 8e-27
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
|||||| ||| |||||||||||| ||| || |||||||| ||||||||||||||||||||
Sbjct: 10 tggtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctg 69
Query: 89 gttaacctcttttccagtatcaaatcccatcttg 122
|||||||| ||||||||||||| |||||| ||||
Sbjct: 70 gttaaccttttttccagtatcagatcccaccttg 103
>31996_mmu-mir-329:mirbase
Length = 97
Score = 101 bits (51), Expect = 1e-22
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 11 tggtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacaccca 70
Query: 89 gttaacctcttttccagtatcaaatcc 115
| |||||| |||| |||||||||||||
Sbjct: 71 gctaacctttttttcagtatcaaatcc 97
>32850_rno-mir-329:mirbase
Length = 97
Score = 101 bits (51), Expect = 1e-22
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 29 tggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctg 88
||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 11 tggtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacaccca 70
Query: 89 gttaacctcttttccagtatcaaatcc 115
| |||||| |||| |||||||||||||
Sbjct: 71 gctaacctttttttcagtatcaaatcc 97
>26800_cfa-mir-329a:mirbase
Length = 60
Score = 95.6 bits (48), Expect = 7e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 41 agaggttttctgggtttctgtttctttaatgaggatgaaacacacctggttaacctcttt 100
||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1 agaggttttctgggtttctgtttctttcatgaggatgaaacacacccagttaacctcttt 60
