miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33813_oar-mir-369:mirbase
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 agcatctctcctggtacctgaagggagatcgaccgtgttatattcgctttattgacttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcatctctcctggtacctgaagggagatcgaccgtgttatattcgctttattgacttcg 60
Query: 61 aataatacatggttgatcttttctcagtatcaaatctcaccttggag 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataatacatggttgatcttttctcagtatcaaatctcaccttggag 107
>33072_rno-mir-3578:mirbase
Length = 117
Score = 139 bits (70), Expect = 5e-34
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 6 ctctcctggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataa 65
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 103 ctctgctggtacttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataa 44
Query: 66 tacatggttgatcttttctcagtatcaaatctcaccttggag 107
|||||||||||||||||||||||||||| |||| |||||||
Sbjct: 43 tacatggttgatcttttctcagtatcaatgctcagcttggag 2
>27867_mml-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>27868_mml-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>28604_hsa-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>28605_hsa-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>30345_ptr-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 79 ttttctcag 87
|||||||||
Sbjct: 61 ttttctcag 69
>30971_ppy-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>30972_ppy-mir-369:mirbase
Length = 70
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctcag 87
|||||||||
Sbjct: 62 ttttctcag 70
>33342_bta-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 79 ttttctcag 87
|||||||||
Sbjct: 61 ttttctcag 69
>33343_bta-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 79 ttttctcag 87
|||||||||
Sbjct: 61 ttttctcag 69
>34075_ssc-mir-369:mirbase
Length = 149
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 12 tggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatg 71
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 35 tggtacttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatg 94
Query: 72 gttgatcttttctcagtatc 91
||||||||||||||||||||
Sbjct: 95 gttgatcttttctcagtatc 114
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 53 tgacttcgaataatacatggttgatcttttctcag 87
|||||||||||||||||||||||||||||||||||
Sbjct: 115 tgacttcgaataatacatggttgatcttttctcag 149
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttat 52
||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgttatattcgctttat 35
>27150_eca-mir-369:mirbase
Length = 70
Score = 125 bits (63), Expect = 7e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctc 85
|||||||
Sbjct: 62 ttttctc 68
>27149_eca-mir-369:mirbase
Length = 70
Score = 125 bits (63), Expect = 7e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgatc 61
Query: 79 ttttctc 85
|||||||
Sbjct: 62 ttttctc 68
>32039_mmu-mir-369:mirbase
Length = 79
Score = 125 bits (63), Expect = 7e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 ggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatgg 72
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ggtacttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatgg 60
Query: 73 ttgatcttttctcagtatc 91
|||||||||||||||||||
Sbjct: 61 ttgatcttttctcagtatc 79
>32040_mmu-mir-369:mirbase
Length = 79
Score = 125 bits (63), Expect = 7e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 ggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatgg 72
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ggtacttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatgg 60
Query: 73 ttgatcttttctcagtatc 91
|||||||||||||||||||
Sbjct: 61 ttgatcttttctcagtatc 79
>32884_rno-mir-369:mirbase
Length = 79
Score = 125 bits (63), Expect = 7e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 ggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatgg 72
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ggtacttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatgg 60
Query: 73 ttgatcttttctcagtatc 91
|||||||||||||||||||
Sbjct: 61 ttgatcttttctcagtatc 79
>32885_rno-mir-369:mirbase
Length = 79
Score = 125 bits (63), Expect = 7e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 ggtacctgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatgg 72
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ggtacttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatgg 60
Query: 73 ttgatcttttctcagtatc 91
|||||||||||||||||||
Sbjct: 61 ttgatcttttctcagtatc 79
>26817_cfa-mir-369:mirbase
Length = 56
Score = 97.6 bits (49), Expect = 2e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 29 tcgaccgtgttatattcgctttattgacttcgaataatacatggttgatcttt 81
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 tcgaccgtgttatattcgctttattgacttcgaataatacatggttggtcttt 56
