miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33816_oar-mir-370:mirbase
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 agtctggggcacaaggcagagaagccaggtcacgtctctgcagttacaccgctctcgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtctggggcacaaggcagagaagccaggtcacgtctctgcagttacaccgctctcgagt 60
Query: 61 gcctgctggggtggaacctggtatgtctgtctgtctagcaccacagc 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcctgctggggtggaacctggtatgtctgtctgtctagcaccacagc 107
>33344_bta-mir-370:mirbase
Length = 75
Score = 133 bits (67), Expect = 3e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 14 aggcagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtg 73
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 aggcagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtg 60
Query: 74 gaacctggtatgtct 88
||||||||| |||||
Sbjct: 61 gaacctggtctgtct 75
>28606_hsa-mir-370:mirbase
Length = 75
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
Query: 77 cctggtatgtct 88
|||||| |||||
Sbjct: 64 cctggtctgtct 75
>30346_ptr-mir-370:mirbase
Length = 74
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 3 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 62
Query: 77 cctggtatgtct 88
|||||| |||||
Sbjct: 63 cctggtctgtct 74
>30973_ppy-mir-370:mirbase
Length = 75
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
Query: 77 cctggtatgtct 88
|||||| |||||
Sbjct: 64 cctggtctgtct 75
>26818_cfa-mir-370:mirbase
Length = 79
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
|||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 4 cagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 77 cctggtatgtctgtct 92
|||||| |||||||||
Sbjct: 64 cctggtctgtctgtct 79
>27869_mml-mir-370:mirbase
Length = 75
Score = 111 bits (56), Expect = 1e-25
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 77 cctggtatgtct 88
|||||| |||||
Sbjct: 64 cctggtctgtct 75
>27151_eca-mir-370:mirbase
Length = 75
Score = 103 bits (52), Expect = 3e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
|||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 4 cagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaa 63
Query: 77 cctggtatgtct 88
|||||| |||||
Sbjct: 64 cctggtctgtct 75
>32041_mmu-mir-370:mirbase
Length = 79
Score = 103 bits (52), Expect = 3e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 25 ccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaacctggtat 84
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
Query: 85 gtctgtct 92
||||||||
Sbjct: 72 gtctgtct 79
>32886_rno-mir-370:mirbase
Length = 79
Score = 103 bits (52), Expect = 3e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 25 ccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaacctggtat 84
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
Query: 85 gtctgtct 92
||||||||
Sbjct: 72 gtctgtct 79
