miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33827_oar-mir-377:mirbase
Length = 131
Score = 260 bits (131), Expect = 2e-70
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 aagaggtatcttggtgctcaggccctgctgacgtttgatccttgagcagaggttgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaggtatcttggtgctcaggccctgctgacgtttgatccttgagcagaggttgccttt 60
Query: 61 ggtgaattcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtatcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtgaattcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtatcaaat 120
Query: 121 cctgcttggga 131
|||||||||||
Sbjct: 121 cctgcttggga 131
>26828_cfa-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>27159_eca-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>27883_mml-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>28621_hsa-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>30984_ppy-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>33352_bta-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 6e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 42 ttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaac 101
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 102 ttttgtttg 110
|||||||||
Sbjct: 61 ttttgtttg 69
>30357_ptr-mir-377:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 43 tgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaact 102
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaact 60
Query: 103 tttgtttg 110
||||||||
Sbjct: 61 tttgtttg 68
>32048_mmu-mir-377:mirbase
Length = 68
Score = 119 bits (60), Expect = 5e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 43 tgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaact 102
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaact 60
Query: 103 tttgtttg 110
||||||||
Sbjct: 61 tttgtttg 68
>32893_rno-mir-377:mirbase
Length = 72
Score = 119 bits (60), Expect = 5e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 41 cttgagcagaggttgcctttggtgaattcgctttatttatgttgaatcacacaaaggcaa 100
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaa 60
Query: 101 cttttgtttgag 112
|||||| |||||
Sbjct: 61 cttttggttgag 72
>27989_mml-mir-539:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 30 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 78
>28787_hsa-mir-539:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 30 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 78
>30466_ptr-mir-539:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 29 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 77
>31126_ppy-mir-539:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 30 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 78
