miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33373_bta-mir-431:mirbase
Length = 114
Score = 168 bits (85), Expect = 4e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 67
Query: 61 cgtcttgcagggcgtctcgcaagacgaca 89
||||||||||||| |||||||||||||||
Sbjct: 68 cgtcttgcagggcttctcgcaagacgaca 96
>27177_eca-mir-431:mirbase
Length = 89
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
Query: 61 cgtcttgcagggcgtctcgcaagacgaca 89
||||||||||||| |||||||||||||||
Sbjct: 61 cgtcttgcagggcttctcgcaagacgaca 89
>32070_mmu-mir-431:mirbase
Length = 91
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
Query: 61 cgtcttgcagggcgtctcgcaagacgaca 89
||||||||||||| |||||||||||||||
Sbjct: 61 cgtcttgcagggcttctcgcaagacgaca 89
>32911_rno-mir-431:mirbase
Length = 114
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 8 cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 67
Query: 61 cgtcttgcagggcgtctcgcaagacgaca 89
||||||||||||| |||||||||||||||
Sbjct: 68 cgtcttgcagggcttctcgcaagacgaca 96
>27903_mml-mir-431:mirbase
Length = 114
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 2 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 62 gtcttgcagggcgtctcgcaagacgaca 89
|||||||||||| |||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgaca 96
>28650_hsa-mir-431:mirbase
Length = 114
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 2 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 62 gtcttgcagggcgtctcgcaagacgaca 89
|||||||||||| |||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgaca 96
>30373_ptr-mir-431:mirbase
Length = 113
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 2 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 67
Query: 62 gtcttgcagggcgtctcgcaagacgaca 89
|||||||||||| |||||||||||||||
Sbjct: 68 gtcttgcagggcttctcgcaagacgaca 95
>31004_ppy-mir-431:mirbase
Length = 114
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 2 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggtc 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68
Query: 62 gtcttgcagggcgtctcgcaagacgaca 89
|||||||||||| |||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgaca 96
