miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33374_bta-mir-432:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gcatgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcatgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgg 60
Query: 61 gccactggatggctcctccatgtcttggcg 90
||||||||||||||||||||||||||||||
Sbjct: 61 gccactggatggctcctccatgtcttggcg 90
>27178_eca-mir-432:mirbase
Length = 89
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgactcctccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 64
Query: 64 actggatggctcctccatgtcttgg 88
|||||||||||||||||||||||||
Sbjct: 65 actggatggctcctccatgtcttgg 89
>26844_cfa-mir-432:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgactcctccaggtcttggagtaggtcattgggtggatccttaatttccctatgtgggcc 60
Query: 64 actggatggctcctccatgtcttggcg 90
|||||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttggcg 87
>27904_mml-mir-432:mirbase
Length = 94
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 1 tgactcctccatgtcttggagtaggtcattgggtggatcctctatttccttatgtgggcc 60
Query: 64 actggatggctcctccatgtcttgg 88
|||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttgg 85
>34095_ssc-mir-432:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 11 tccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 70
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 60
Query: 71 ggctcctccatgtcttgg 88
|||||||||||| |||||
Sbjct: 61 ggctcctccatggcttgg 78
>34096_ssc-mir-432:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 11 tccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 70
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 60
Query: 71 ggctcctccatgtcttgg 88
|||||||||||| |||||
Sbjct: 61 ggctcctccatggcttgg 78
>28651_hsa-mir-432:mirbase
Length = 94
Score = 137 bits (69), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
Query: 64 actggatggctcctccatgtcttgg 88
|||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttgg 85
>31005_ppy-mir-432:mirbase
Length = 94
Score = 137 bits (69), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
Query: 64 actggatggctcctccatgtcttgg 88
|||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttgg 85
>30374_ptr-mir-432:mirbase
Length = 93
Score = 135 bits (68), Expect = 6e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 5 gactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcca 64
|||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 1 gactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcca 60
Query: 65 ctggatggctcctccatgtcttgg 88
||||||||||||||||||||||||
Sbjct: 61 ctggatggctcctccatgtcttgg 84
>32071_mmu-mir-432:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 gggccactggatggctcctcca 80
||||||||||||||||||||||
Sbjct: 27 gggccactggatggctcctcca 48
