miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33851_oar-mir-485:mirbase
Length = 111
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 caagtgtccacttatggtacttgaagagaggctggccgtgatgaattcgattcatcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagtgtccacttatggtacttgaagagaggctggccgtgatgaattcgattcatcaaag 60
Query: 61 cgagtcatacacggctctcctctcttttagtgtcaaattctgcctcggagg 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagtcatacacggctctcctctcttttagtgtcaaattctgcctcggagg 111
>27188_eca-mir-485:mirbase
Length = 73
Score = 145 bits (73), Expect = 8e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>27189_eca-mir-485:mirbase
Length = 73
Score = 145 bits (73), Expect = 8e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>33390_bta-mir-485:mirbase
Length = 73
Score = 145 bits (73), Expect = 8e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>27920_mml-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>27921_mml-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>28671_hsa-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>28672_hsa-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>31020_ppy-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>31021_ppy-mir-485:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||||||||
Sbjct: 61 cctctcttttagt 73
>30388_ptr-mir-485:mirbase
Length = 72
Score = 135 bits (68), Expect = 8e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 20 cttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctc 79
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctc 60
Query: 80 ctctcttttagt 91
||||||||||||
Sbjct: 61 ctctcttttagt 72
>32930_rno-mir-485:mirbase
Length = 79
Score = 121 bits (61), Expect = 1e-28
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 18 tacttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctc 77
|||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 3 tacttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctc 62
Query: 78 tcctctcttttagtgtc 94
||||||||| |||||||
Sbjct: 63 tcctctcttctagtgtc 79
>26855_cfa-mir-485:mirbase
Length = 59
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 27 agaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctcctctct 85
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctcctctct 59
>32174_mmu-mir-485:mirbase
Length = 73
Score = 113 bits (57), Expect = 3e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
Query: 79 cctctcttttagt 91
|||||||| ||||
Sbjct: 61 cctctcttctagt 73
