miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33875_oar-mir-655:mirbase
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
Query: 61 ataatacatggttaacctctctttgaatatcaaacttcgcctcgagg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataatacatggttaacctctctttgaatatcaaacttcgcctcgagg 107
>33439_bta-mir-655:mirbase
Length = 97
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
Query: 61 ataatacatggttaacctctctttgaatatca 92
||||||||||||||||||||||||||||||||
Sbjct: 61 ataatacatggttaacctctctttgaatatca 92
>27248_eca-mir-655:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aactgttcaaggatatttgaggagaggttatccgtgttatgttcgcttcattcatcatga 60
Query: 61 ataatacatggttaacctctctttgaatatca 92
|||||||||||||||||||| |||||||||||
Sbjct: 61 ataatacatggttaacctctttttgaatatca 92
>31226_ppy-mir-655:mirbase
Length = 97
Score = 135 bits (68), Expect = 7e-33
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 1 aactgttcagggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatga 60
|||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aactattcaaggatatttgaggagaggttatccgtgttatgttcgcttcattcatcatga 60
Query: 61 ataatacatggttaacctctctttgaatatca 92
|||||||||||||||||||| |||||||||||
Sbjct: 61 ataatacatggttaacctctttttgaatatca 92
>28974_hsa-mir-655:mirbase
Length = 97
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 11 ggatatttgaggagaggttatccgtgttatgttcgcttggctcatcatgaataatacatg 70
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11 ggatatttgaggagaggttatccgtgttatgttcgcttcattcatcatgaataatacatg 70
Query: 71 gttaacctctctttgaatatca 92
|||||||||| |||||||||||
Sbjct: 71 gttaacctctttttgaatatca 92
