miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33876_oar-mir-665:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 cctggaggagggtctccttgaggggtcttggcctctgcccatgactctttcatgaccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggaggagggtctccttgaggggtcttggcctctgcccatgactctttcatgaccagt 60
Query: 61 aggccgaggcccctcacaggcggctgcttactctcc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggccgaggcccctcacaggcggctgcttactctcc 96
>33444_bta-mir-665:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 13 tctccttgaggggtcttggcctctgcccatgactctttcatgaccagtaggccgaggccc 72
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tctccttgaggggtcttggcctctgcccaggactctttcatgaccagtaggccgaggccc 60
Query: 73 ctcacaggcggc 84
||||||||||||
Sbjct: 61 ctcacaggcggc 72
>28105_mml-mir-665:mirbase
Length = 72
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 13 tctccttgaggggtcttggcctctgcccatgactctttcatgaccagtaggccgaggccc 72
|||||| ||||||||| |||||| |||| ||||||||||||||||| |||| |||||||
Sbjct: 1 tctcctcgaggggtctctgcctctacccaggactctttcatgaccaggaggctgaggccc 60
Query: 73 ctcacaggcggc 84
||||||||||||
Sbjct: 61 ctcacaggcggc 72
>28985_hsa-mir-665:mirbase
Length = 72
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 13 tctccttgaggggtcttggcctctgcccatgactctttcatgaccagtaggccgaggccc 72
|||||| ||||||||| |||||| |||| ||||||||||||||||| |||| |||||||
Sbjct: 1 tctcctcgaggggtctctgcctctacccaggactctttcatgaccaggaggctgaggccc 60
Query: 73 ctcacaggcggc 84
||||||||||||
Sbjct: 61 ctcacaggcggc 72
>30585_ptr-mir-665:mirbase
Length = 71
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 14 ctccttgaggggtcttggcctctgcccatgactctttcatgaccagtaggccgaggcccc 73
||||| ||||||||| |||||| |||| ||||||||||||||||| |||| ||||||||
Sbjct: 1 ctcctggaggggtctccgcctctacccaggactctttcatgaccaggaggctgaggcccc 60
Query: 74 tcacaggcggc 84
|||||||||||
Sbjct: 61 tcacaggcggc 71
