miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33881_oar-mir-758:mirbase
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 ccacgtgcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgtgcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgttt 60
Query: 61 gtgacctggtccactaaccctcagtatctaatcccctcttg 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacctggtccactaaccctcagtatctaatcccctcttg 101
>33451_bta-mir-758:mirbase
Length = 88
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 7 gcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacc 66
||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 gcctgggtacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacc 60
Query: 67 tggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||||||||||
Sbjct: 61 tggtccactaaccctcagtatctaatcc 88
>27261_eca-mir-758:mirbase
Length = 85
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 7 gcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacc 66
||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 gcctgggtacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacc 60
Query: 67 tggtccactaaccctcagtatctaa 91
|||||||||||||||||||||||||
Sbjct: 61 tggtccactaaccctcagtatctaa 85
>28997_hsa-mir-758:mirbase
Length = 88
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 7 gcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacc 66
|||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 gcctggatacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacc 60
Query: 67 tggtccactaaccctcagtatctaat 92
||||||||||||||||||||||||||
Sbjct: 61 tggtccactaaccctcagtatctaat 86
>31240_ppy-mir-758:mirbase
Length = 88
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 7 gcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacc 66
|||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 gcctggatacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacc 60
Query: 67 tggtccactaaccctcagtatctaat 92
||||||||||||||||||||||||||
Sbjct: 61 tggtccactaaccctcagtatctaat 86
>26903_cfa-mir-758:mirbase
Length = 81
Score = 137 bits (69), Expect = 2e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 9 ctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacctg 68
||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1 ctgggtacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacctg 60
Query: 69 gtccactaaccctcagtatct 89
|||||||||||||||||||||
Sbjct: 61 gtccactaaccctcagtatct 81
>30594_ptr-mir-758:mirbase
Length = 87
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 8 cctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacct 67
||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1 cctggatacatgagatggttgaccagagagcacacgctttatttgtgccgtttgtgacct 60
Query: 68 ggtccactaaccctcagtatctaat 92
|||||||||||||||||||||||||
Sbjct: 61 ggtccactaaccctcagtatctaat 85
>32346_mmu-mir-758:mirbase
Length = 81
Score = 121 bits (61), Expect = 1e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 18 tgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacctggtccactaa 77
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 9 tgaggtggttgaccagagagcacacgctatatttgtgccgtttgtgacctggtccactaa 68
Query: 78 ccctcagtatcta 90
|||||||||||||
Sbjct: 69 ccctcagtatcta 81
>34134_ssc-mir-758:mirbase
Length = 76
Score = 121 bits (61), Expect = 1e-28
Identities = 74/77 (96%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 12 ggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacctggtc 71
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 1 ggtacatgaggtggttgaccagagagcacacgctttatt-gtgccgtttgtgacctggtc 59
Query: 72 cactaaccctcagtatc 88
|||||||||||||||||
Sbjct: 60 cactaaccctcagtatc 76
>32990_rno-mir-758:mirbase
Length = 78
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 18 tgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacctggtccactaa 77
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 7 tgaggtggttgaccagagagcacacgctatatttgtgccgtttgtgacctggtccactaa 66
Query: 78 ccctcagtatct 89
||||||||||||
Sbjct: 67 ccctcagtatct 78
>28113_mml-mir-758:mirbase
Length = 88
Score = 115 bits (58), Expect = 6e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 7 gcctgggtacatgaggtggttgaccagagagcacacacttcatttgtgccgtttgtgacc 66
|||||| ||| |||| |||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 1 gcctggatacgtgagatggttgaccagagagcacacgctttatatgtgccgtttgtgacc 60
Query: 67 tggtccactaaccctcagtatctaat 92
|||||||||| |||||||||||||||
Sbjct: 61 tggtccactacccctcagtatctaat 86
>28641_hsa-mir-411:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||| |||||
Sbjct: 61 ggtccactaaccctcagtatcaaatcc 87
>30366_ptr-mir-411:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||| |||||
Sbjct: 60 ggtccactaaccctcagtatcaaatcc 86
>30995_ppy-mir-411:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||| |||||
Sbjct: 61 ggtccactaaccctcagtatcaaatcc 87
>33840_oar-mir-411a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||| |||||
Sbjct: 90 ggtccactaaccctcagtatcaaatcc 116
>33841_oar-mir-411a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatctaatcc 94
||||||||||||||||||||| |||||
Sbjct: 90 ggtccactaaccctcagtatcaaatcc 116
>27170_eca-mir-411:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 61 ggtccactaaccctcagtatc 81
>27894_mml-mir-411:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 61 ggtccactaaccctcagtatc 81
>32062_mmu-mir-411:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 61 ggtccactaaccctcagtatc 81
>32905_rno-mir-411:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 56 ggtccactaaccctcagtatc 76
>33364_bta-mir-411:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 61 ggtccactaaccctcagtatc 81
>34087_ssc-mir-411:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ggtccactaaccctcagtatc 88
|||||||||||||||||||||
Sbjct: 56 ggtccactaaccctcagtatc 76
