miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33883_oar-mir-1185:mirbase
Length = 106
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 agctgccctttggtacttgaagagaggataccctttgtatgttcacttaattaatggcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctgccctttggtacttgaagagaggataccctttgtatgttcacttaattaatggcga 60
Query: 61 atatacagagggagactcttatttgcgtatcaaactctgactggga 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatacagagggagactcttatttgcgtatcaaactctgactggga 106
>33468_bta-mir-1185:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tttggtacttgaagagaggataccctttgtatgttcactttattaatggcgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
||||||||||||||||||||||||||
Sbjct: 61 agggagactcttatttgcgtatcaaa 86
>29056_hsa-mir-1185-1:mirbase
Length = 86
Score = 155 bits (78), Expect = 8e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tttggtacttgaagagaggataccctttgtatgttcacttgattaatggcgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
|||||||||||||||||||||||||
Sbjct: 61 ggggagactcttatttgcgtatcaaa 86
>31283_ppy-mir-1185-1:mirbase
Length = 86
Score = 155 bits (78), Expect = 8e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tttggtacttgaagagaggataccctttgtatgttcacttgattaatggcgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
|||||||||||||||||||||||||
Sbjct: 61 ggggagactcttatttgcgtatcaaa 86
>30636_ptr-mir-1185-1:mirbase
Length = 85
Score = 153 bits (77), Expect = 3e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 10 ttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacaga 69
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ttggtacttgaagagaggataccctttgtatgttcacttgattaatggcgaatatacagg 60
Query: 70 gggagactcttatttgcgtatcaaa 94
|||||||||||||||||||||||||
Sbjct: 61 gggagactcttatttgcgtatcaaa 85
>27283_eca-mir-1185:mirbase
Length = 86
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1 tttggtacttgaagagaggataccctttgtatgttcacttcattaatgacgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
|||||||||||||||||||||||||
Sbjct: 61 ggggagactcttatttgcgtatcaaa 86
>31284_ppy-mir-1185-2:mirbase
Length = 86
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tttggtacttaaagagaggataccctttgtatgttcacttgattaatggcgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
|||||||||||||||||||||||||
Sbjct: 61 ggggagactcttatttgcgtatcaaa 86
>29057_hsa-mir-1185-2:mirbase
Length = 86
Score = 139 bits (70), Expect = 5e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 9 tttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacag 68
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tttggtacttaaagagaggataccctttgtatgttcacttgattaatggcgaatatacag 60
Query: 69 agggagactcttatttgcgtatcaaa 94
|||||||||| ||||||||||||||
Sbjct: 61 ggggagactctcatttgcgtatcaaa 86
>30637_ptr-mir-1185-2:mirbase
Length = 85
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 10 ttggtacttgaagagaggataccctttgtatgttcacttaattaatggcgaatatacaga 69
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ttggtacttaaagagaggataccctttgtatgttcacttgattaatggcgaatatacagg 60
Query: 70 gggagactcttatttgcgtatcaaa 94
|||||||||| ||||||||||||||
Sbjct: 61 gggagactctcatttgcgtatcaaa 85
