miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27480_age-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>27589_sla-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>27652_mml-mir-16-1:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>28172_mne-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>28260_ggo-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>28362_hsa-mir-16-1:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>30044_ppa-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>30148_ptr-mir-16-1:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>30753_ppy-mir-16:mirbase
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>27541_lla-mir-16:mirbase
Length = 89
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgctaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>33130_bta-mir-16a:mirbase
Length = 89
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggtgttaagattctaaaattatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>27334_mdo-mir-16:mirbase
Length = 90
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggcgttaagattttaaaagtatctccagtattaa 65
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 66 ctgtgctgctgaagtaagg 84
>26625_cfa-mir-16-1:mirbase
Length = 65
Score = 129 bits (65), Expect = 3e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgctg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgctg 60
Query: 69 ctgaa 73
|||||
Sbjct: 61 ctgaa 65
>31777_mmu-mir-16-1:mirbase
Length = 93
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 3 gtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaact 62
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 10 gtgccttagcagcacgtaaatattggcgttaagattctgaaattacctccagtattgact 69
Query: 63 gtgctgctgaagtaagg 79
|||||||||||||||||
Sbjct: 70 gtgctgctgaagtaagg 86
>26948_eca-mir-16-2:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgctg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgctg 60
Query: 69 ctg 71
|||
Sbjct: 61 ctg 63
>31428_oan-mir-16a:mirbase
Length = 132
Score = 125 bits (63), Expect = 5e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaa 60
|||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
Sbjct: 21 cagtaccttagcagcacgtaaatattggcgttaagactctaaaagtatctccagtattga 80
Query: 61 ctgtgctgctgaagtaagg 79
|||||||||||||||||||
Sbjct: 81 ctgtgctgctgaagtaagg 99
>31394_lca-mir-16:mirbase
Length = 74
Score = 101 bits (51), Expect = 7e-23
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 cagtgccttagcagcacgtaaatattggcgttaagattctaaaattatctc-cagtatta 59
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 6 cagtgccttagcagcacgtaaatattggtgttaagattctaaaattatctctaagtatta 65
Query: 60 actgtgc 66
|||||||
Sbjct: 66 actgtgc 72
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 8 ttagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgct 67
||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||||||
Sbjct: 10 ttagcagcacgtaaatattggtgttaagactgtaaa--tatctccagtattaactgtgct 67
Query: 68 gctgaagtaagg 79
||||||||||||
Sbjct: 68 gctgaagtaagg 79
>25894_gga-mir-16-1:mirbase
Length = 84
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgttaagattctaaaattatctccagtattaactgtgctg 68
|||||||||||||||||||| ||||| | | |||| |||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggtgttaaaactgtaaa--tatctccagtattaactgtgctg 71
Query: 69 ctgaagtaagg 79
|||||||||||
Sbjct: 72 ctgaagtaagg 82
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 ttagcagcacgtaaatattggcgttaa 34
||||||||||||||||||||| |||||
Sbjct: 13 ttagcagcacgtaaatattggtgttaa 39
>26626_cfa-mir-16-2:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggcgt 23
>26947_eca-mir-16:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattggcgt 32
>27653_mml-mir-16-2:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattggcgt 32
>28363_hsa-mir-16-2:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattggcgt 32
>30149_ptr-mir-16-2:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 9 tagcagcacgtaaatattggcgt 31
>31778_mmu-mir-16-2:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgt 39
>32659_rno-mir-16:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgt 39
>33131_bta-mir-16b:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggcgt 39
>33913_ssc-mir-16-1:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgt 31
|||||||||||||||||||||||
Sbjct: 8 tagcagcacgtaaatattggcgt 30
>34547_fru-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgttaag 35
|||||||||||||||||||| ||||||
Sbjct: 13 tagcagcacgtaaatattggagttaag 39
>34695_tni-mir-16:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattggcgttaag 35
|||||||||||||||||||| ||||||
Sbjct: 1 tagcagcacgtaaatattggagttaag 27
>25701_xtr-mir-16b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 ttagcagcacgtaaatattgg 28
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>34206_dre-mir-16a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 ttagcagcacgtaaatattgg 28
|||||||||||||||||||||
Sbjct: 12 ttagcagcacgtaaatattgg 32
>25429_pma-mir-16:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>25895_gga-mir-16-2:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>26400_tgu-mir-16b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 11 tagcagcacgtaaatattgg 30
>30754_ppy-mir-16-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>31429_oan-mir-16b:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 21 tagcagcacgtaaatattgg 40
>34207_dre-mir-16b:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tagcagcacgtaaatattgg 28
||||||||||||||||||||
Sbjct: 39 tagcagcacgtaaatattgg 58
