miRNEST 2.0, an integrative microRNA resource :: BLAST
>27657_mml-mir-18b:mirbase
Length = 71
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 66 cccttctggca 76
|||||||||||
Sbjct: 61 cccttctggca 71
>28366_hsa-mir-18b:mirbase
Length = 71
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 66 cccttctggca 76
|||||||||||
Sbjct: 61 cccttctggca 71
>30758_ppy-mir-18b:mirbase
Length = 71
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 66 cccttctggca 76
|||||||||||
Sbjct: 61 cccttctggca 71
>31781_mmu-mir-18b:mirbase
Length = 83
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 tctcttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgcccta 60
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1 tctcttgtgttaaggtgcatctagtgctgttagtgaagcagcttacaatctactgcccta 60
Query: 61 aatgccccttctggcacaggct 82
|||||||||||| |||||||||
Sbjct: 61 aatgccccttctcgcacaggct 82
>31432_oan-mir-18:mirbase
Length = 130
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaat 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22 cttgtgttaaggtgcatctagtgcagttagtgaagtagcttagaatctactgccctaaat 81
Query: 64 gccccttctggcacaggctg 83
|| |||||||||||| ||||
Sbjct: 82 gctccttctggcacaagctg 101
>33135_bta-mir-18b:mirbase
Length = 75
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaat 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 cttgtgttaaggtgcatctagtgcagttagtgaagcagctcagaatctactgccctaaat 60
Query: 64 gccccttctggcaca 78
|| ||||||||||||
Sbjct: 61 gctccttctggcaca 75
>30153_ptr-mir-18b:mirbase
Length = 70
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 66 cccttctggc 75
||| ||||||
Sbjct: 61 cccatctggc 70
>26629_cfa-mir-18b:mirbase
Length = 77
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 3 tgtgttaaggtgcatctagtgcagttagtgaagccgcttagaacctactgccctaaatgc 62
Query: 66 cccttctggcacagg 80
|||||| ||||||||
Sbjct: 63 cccttccggcacagg 77
>25900_gga-mir-18b:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaat 63
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 8 cttgtgttaaggtgcatctagtgcagttagtgacgtagcgtagaatctactgccctaaat 67
Query: 64 gccccttctggcaca 78
|| ||||||||||||
Sbjct: 68 gctccttctggcaca 82
>26951_eca-mir-18b:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccct 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccct 59
>25656_xla-mir-18:mirbase
Length = 79
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaat 63
||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 2 cttgtgttaaggtgcatctagtgcagttagtgacatagcgtagcatctactgccctaaat 61
Query: 64 gccccttctggcacagg 80
|| |||| |||||||||
Sbjct: 62 gctccttttggcacagg 78
>25706_xtr-mir-18b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaat 63
||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 2 cttgtgttaaggtgcatctagtgcagttagtgacatagtgtagcatctactgccctaaat 61
Query: 64 gccccttctggcacagg 80
|| |||| |||||||||
Sbjct: 62 gctccttttggcacagg 78
>25705_xtr-mir-18a:mirbase
Length = 87
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 71 ctggca 76
||||||
Sbjct: 74 ctggca 79
>25899_gga-mir-18a:mirbase
Length = 93
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 71 ctggca 76
||||||
Sbjct: 74 ctggca 79
>26628_cfa-mir-18a:mirbase
Length = 92
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 71 ctggca 76
||||||
Sbjct: 74 ctggca 79
>27337_mdo-mir-18:mirbase
Length = 72
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 7 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 66
Query: 71 ctggca 76
||||||
Sbjct: 67 ctggca 72
>27483_age-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>27544_lla-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>27592_sla-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>27656_mml-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>28175_mne-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>28263_ggo-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>28365_hsa-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>30047_ppa-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>30152_ptr-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>30757_ppy-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>31397_lca-mir-18:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>33134_bta-mir-18a:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 71 ctggca 76
||||||
Sbjct: 66 ctggca 71
>33917_ssc-mir-18a:mirbase
Length = 92
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 71 ctggca 76
||||||
Sbjct: 74 ctggca 79
>26404_tgu-mir-18a:mirbase
Length = 72
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 11 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 70
Query: 71 ct 72
||
Sbjct: 71 ct 72
>31780_mmu-mir-18a:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| ||||
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 71 ctggca 76
||||||
Sbjct: 77 ctggca 82
>32664_rno-mir-18a:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| ||||
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 71 ctggca 76
||||||
Sbjct: 77 ctggca 82
>26950_eca-mir-18a:mirbase
Length = 61
Score = 73.8 bits (37), Expect = 2e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||
Sbjct: 1 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 60
Query: 71 c 71
|
Sbjct: 61 c 61
>34211_dre-mir-18a:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 5 ttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatg 64
||||| ||||||||||||||||||| |||||||| || ||| | |||||||||||| ||
Sbjct: 5 ttgtgctaaggtgcatctagtgcagatagtgaagtagactagcacctactgccctaagtg 64
Query: 65 ccccttctggcac 77
| |||||||||||
Sbjct: 65 ctccttctggcac 77
>26405_tgu-mir-18b:mirbase
Length = 132
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagtga 36
|||||||||||||||||||||||||||||||||
Sbjct: 94 cttgtgttaaggtgcatctagtgcagttagtga 126
>34550_fru-mir-18:mirbase
Length = 76
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 5 ttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatg 64
||||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| ||
Sbjct: 1 ttgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtg 60
Query: 65 ccccttctggca 76
| ||||||||||
Sbjct: 61 ctccttctggca 72
>34698_tni-mir-18:mirbase
Length = 76
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 5 ttgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatg 64
||||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| ||
Sbjct: 1 ttgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtg 60
Query: 65 ccccttctggca 76
| ||||||||||
Sbjct: 61 ctccttctggca 72
>34212_dre-mir-18b:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccctt 70
|||||||||| |||||||| ||||||| || ||| | |||||||||||| ||||||||
Sbjct: 13 taaggtgcatttagtgcagatagtgaaatagactagcacctactgccctaagtgcccctt 72
Query: 71 ctggca 76
||||||
Sbjct: 73 ctggca 78
>25433_pma-mir-18a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 cttgtgttaaggtgcatctagtgcagttagt 34
|||||| ||||||||||||||||||| ||||
Sbjct: 11 cttgtgctaaggtgcatctagtgcagatagt 41
>34213_dre-mir-18c:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgc 56
|||||||||||| ||| ||||||||||| || ||| |||||||||
Sbjct: 11 taaggtgcatcttgtgtagttagtgaagtagtctagtatctactgc 56
