miRNEST 2.0, an integrative microRNA resource :: BLAST
>26994_eca-mir-98:mirbase
Length = 119
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 78
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 79 actatacaacttactacttt 98
>26672_cfa-mir-98:mirbase
Length = 80
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
Query: 64 atacaacttactacttt 80
|||||||||||||||||
Sbjct: 61 atacaacttactacttt 77
>28411_hsa-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 19 gggtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagata 78
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 79 actatacaacttactacttt 98
>30195_ptr-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 19 gggtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagata 78
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 79 actatacaacttactacttt 98
>32705_rno-mir-98:mirbase
Length = 108
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 13 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaataagaagata 72
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 73 actatacaacttactacttt 92
>33184_bta-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 19 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagata 78
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 79 actatacaacttactacttt 98
>27500_age-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 63 tatacaacttactacttt 80
||||||||||||||||||
Sbjct: 61 tatacaacttactacttt 78
>27701_mml-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 63 tatacaacttactacttt 80
||||||||||||||||||
Sbjct: 61 tatacaacttactacttt 78
>28291_ggo-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 63 tatacaacttactacttt 80
||||||||||||||||||
Sbjct: 61 tatacaacttactacttt 78
>30078_ppa-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 63 tatacaacttactacttt 80
||||||||||||||||||
Sbjct: 61 tatacaacttactacttt 78
>30801_ppy-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 63 tatacaacttactacttt 80
||||||||||||||||||
Sbjct: 61 tatacaacttactacttt 78
>31824_mmu-mir-98:mirbase
Length = 108
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 13 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccagtaagaagata 72
Query: 61 actatacaacttactacttt 80
||||||||||||||||||||
Sbjct: 73 actatacaacttactacttt 92
>31469_oan-mir-98:mirbase
Length = 149
Score = 87.7 bits (44), Expect = 1e-18
Identities = 72/79 (91%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtggggtagggatt--ttaggccccaattagaagataa 61
|||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 31 tgaggtagtaagttgtattgttgtggggtagggatttcttttgccccaattag-cgataa 89
Query: 62 ctatacaacttactacttt 80
|||||||| ||||||||||
Sbjct: 90 ctatacaatttactacttt 108
>25753_xtr-mir-98:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtgggg 31
||||||||||||||||||||||||||||
Sbjct: 17 tgaggtagtaagttgtattgttgtgggg 44
>27321_mdo-let-7b:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
||||||||||||| ||||| | ||| |||||| |||||| |||||||| ||||||||
Sbjct: 5 gggtgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcagaagata 62
Query: 61 actatacaacttact 75
|||||||||| ||||
Sbjct: 63 actatacaacctact 77
>26934_eca-let-7f:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 5 gtgaggtagtagattgtatagttgtggggtagtgatttta 44
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtagtgatttta 46
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtagtgatttta 46
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 87 gtgaggtagtagattgtatagttgtggggtagtgatttta 48
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>26610_cfa-let-7f:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtggggtagggatttta 42
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtagtgatttta 39
>34181_dre-let-7h:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 ggtgaggtagtaagttgtattgttgt 27
|||||||||||||||||| |||||||
Sbjct: 17 ggtgaggtagtaagttgtgttgttgt 42
>34532_fru-let-7h:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 ggtgaggtagtaagttgtattgttgt 27
|||||||||||||||||| |||||||
Sbjct: 4 ggtgaggtagtaagttgtgttgttgt 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 agataactatacaacttact 75
||||||||||||||||||||
Sbjct: 57 agataactatacaacttact 76
>34680_tni-let-7h:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 ggtgaggtagtaagttgtattgttgt 27
|||||||||||||||||| |||||||
Sbjct: 16 ggtgaggtagtaagttgtgttgttgt 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 agataactatacaacttact 75
||||||||||||||||||||
Sbjct: 72 agataactatacaacttact 91
>25871_gga-let-7b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
Query: 64 atacaacttact 75
||||||| ||||
Sbjct: 64 atacaacctact 75
>26379_tgu-let-7b:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 11 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 68
Query: 64 atacaacttact 75
||||||| ||||
Sbjct: 69 atacaacctact 80
>31410_oan-let-7b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 gccccaattagaagataactataca 68
|||||||| ||||||||||||||||
Sbjct: 43 gccccaatcagaagataactataca 67
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 agataactatacaacttact 75
||||||||||||||||||||
Sbjct: 62 agataactatacaacttact 81
>34178_dre-let-7f:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 3 gtgaggtagtaagttgtattgttgtggggtagggatttta 42
||||||||||| |||||| ||||| |||||| |||||||
Sbjct: 19 gtgaggtagtagattgtatagttgtagggtagtgatttta 58
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 agataactatacaacttact 75
||||||||||||||||||||
Sbjct: 48 agataactatacaacttact 67
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 agataactatacaacttact 75
||||||||||||||||||||
Sbjct: 56 agataactatacaacttact 75
>27632_mml-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 53 agaagataactatacaacttact 75
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
>30129_ptr-let-7b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 53 agaagataactatacaacttact 75
|||||||||||||||||| ||||
Sbjct: 50 agaagataactatacaacctact 72
>30734_ppy-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 53 agaagataactatacaacttact 75
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
