miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32710_rno-mir-101b:mirbase
Length = 97
Score = 165 bits (83), Expect = 7e-42
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 1 gactgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7 gactgaactgtcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagt 66
Query: 61 actgtgataactgaagaatggtggtgccatc 91
||||||||| |||||||||||||||||||||
Sbjct: 67 actgtgatagctgaagaatggtggtgccatc 97
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>33188_bta-mir-101:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 8 ctgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtga 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtga 60
Query: 68 taactgaagaatggtggt 85
||||||||||||||||||
Sbjct: 61 taactgaagaatggtggt 78
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 4 tgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtact 63
|||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 4 tgaactgtcctttttcggttatcatggtaccggtgctgtgtatatgaaaggtacagtact 63
Query: 64 gtgataactgaagaatggtggtgccatc 91
||||||||||||||||||||||||||||
Sbjct: 64 gtgataactgaagaatggtggtgccatc 91
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcatggtaccgatgctgtatatgtgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 12 cctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataac 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataac 60
Query: 72 tgaagaatggtg 83
||||||||||||
Sbjct: 61 tgaagaatggtg 72
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 7 actgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtg 66
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 1 actgtcctttttcggttatcacggtaccgatgctgtatatgtgaaaggtacagtactgtg 60
Query: 67 ataactgaagaatggtggt 85
|||||||||||||||||||
Sbjct: 61 ataactgaagaatggtggt 79
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 141 bits (71), Expect = 1e-34
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 1 gactgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagt 60
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7 gactgaactgccctttttcggttatcatggtaccgatgctgtagctctgaaaggtacagt 66
Query: 61 actgtgataactgaagaatggtggtgccatc 91
||||||||| ||||||||||| |||||||||
Sbjct: 67 actgtgatagctgaagaatggcggtgccatc 97
>25931_gga-mir-101:mirbase
Length = 79
Score = 125 bits (63), Expect = 6e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 11 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 70
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
Query: 71 ctgaagaatggtggt 85
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 119 bits (60), Expect = 4e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 14 tttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactg 73
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactg 60
Query: 74 aagaatggtggt 85
||||||||||||
Sbjct: 61 aagaatggtggt 72
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 109 bits (55), Expect = 3e-25
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 20 ggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 74
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 55
>34728_tni-mir-101b:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 7e-14
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 4 tgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtact 63
|||||||||| ||||||||||||||||||||| |||||| | || | ||||||||||
Sbjct: 1 tgaactgtccattttcggttatcatggtaccgctgctgtgtccctctcaagtacagtact 60
Query: 64 gtgataactgaagaatggtggtgccatc 91
||||||||||||| ||| ||||||||
Sbjct: 61 atgataactgaagattggcagtgccatc 88
>34581_fru-mir-101b:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 4 tgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtact 63
|||||||||| ||||| ||||||||||||||| |||||| | || | ||||||||||
Sbjct: 1 tgaactgtccattttcagttatcatggtaccgctgctgtgtccctctcaagtacagtact 60
Query: 64 gtgataactgaagaatggtggtgccatc 91
||||||||||||| ||| ||||||||
Sbjct: 61 atgataactgaagattggcagtgccatc 88
>34265_dre-mir-101a:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 7e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 35 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 81
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
>34266_dre-mir-101b:mirbase
Length = 112
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 4 tgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtact 63
|||| ||||| ||||| ||||||||||||||| |||||| | ||| | ||||||||||
Sbjct: 13 tgaattgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtact 72
Query: 64 gtgataactgaaga 77
|||||||||||||
Sbjct: 73 atgataactgaaga 86
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatggt 82
||||||||||||||||||||||||||| |||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatggt 78
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaaggatgg 75
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaaggatgg 68
>27502_age-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27564_lla-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27611_sla-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28202_mne-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28294_ggo-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30081_ppa-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30804_ppy-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>32709_rno-mir-101a:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaagaatgg 81
||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 aaggtacagtactgtgataactgaagaatgg 81
|||||||||||||||||||||||||| ||||
Sbjct: 47 aaggtacagtactgtgataactgaaggatgg 77
>34580_fru-mir-101a:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 aaggtacagtactgtgataactgaagaatgg 81
|||||||||||||||||||||||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>34727_tni-mir-101a:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 aaggtacagtactgtgataactgaagaatgg 81
|||||||||||||||||||||||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>26998_eca-mir-101:mirbase
Length = 59
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactgaa 75
||||||||||||||||||||||||||
Sbjct: 34 aaaggtacagtactgtgataactgaa 59
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 aaaggtacagtactgtgataactga 74
|||||||||||||||||||||||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
