miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33208_bta-mir-129-1:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 7 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 60
Query: 67 caaaaagtatct 78
||||||||||||
Sbjct: 61 caaaaagtatct 72
>27018_eca-mir-129a:mirbase
Length = 73
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 6 tggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacc 65
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttacc 60
Query: 66 ccaaaaagtatct 78
|||||||||||||
Sbjct: 61 ccaaaaagtatct 73
>27019_eca-mir-129a:mirbase
Length = 73
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 6 tggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacc 65
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttacc 60
Query: 66 ccaaaaagtatct 78
|||||||||||||
Sbjct: 61 ccaaaaagtatct 73
>27725_mml-mir-129:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 7 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 66
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttaccc 60
Query: 67 caaaaagtatct 78
||||||||||||
Sbjct: 61 caaaaagtatct 72
>27726_mml-mir-129:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 7 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 66
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttaccc 60
Query: 67 caaaaagtatct 78
||||||||||||
Sbjct: 61 caaaaagtatct 72
>28439_hsa-mir-129-1:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 7 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 66
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttaccc 60
Query: 67 caaaaagtatct 78
||||||||||||
Sbjct: 61 caaaaagtatct 72
>30825_ppy-mir-129-1:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 7 ggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccc 66
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttaccc 60
Query: 67 caaaaagtatct 78
||||||||||||
Sbjct: 61 caaaaagtatct 72
>30216_ptr-mir-129-1:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 8 gatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacccc 67
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gatctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttacccc 60
Query: 68 aaaaagtatct 78
|||||||||||
Sbjct: 61 aaaaagtatct 71
>31484_oan-mir-129:mirbase
Length = 128
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 5 ttggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttac 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 24 ttggatctttttgcggtctgggcttgctgttcctctaatcagtagtcaggaagcccttac 83
Query: 65 cccaaaaagtatctgcg 81
|||||||||||||||||
Sbjct: 84 cccaaaaagtatctgcg 100
>26696_cfa-mir-129-1:mirbase
Length = 65
Score = 121 bits (61), Expect = 8e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 11 ctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccccaaa 70
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctttttgcggtctgggcttgctgttcctctcaacagtagtcaggaagcccttaccccaaa 60
Query: 71 aagta 75
|||||
Sbjct: 61 aagta 65
>31852_mmu-mir-129-1:mirbase
Length = 73
Score = 121 bits (61), Expect = 8e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 6 tggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacc 65
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 tggatctttttgcggtctgggcttgctgttc-tctcgacagtagtcaggaagcccttacc 59
Query: 66 ccaaaaagtatct 78
|||||||||||||
Sbjct: 60 ccaaaaagtatct 72
>31853_mmu-mir-129-1:mirbase
Length = 73
Score = 121 bits (61), Expect = 8e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 6 tggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacc 65
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 tggatctttttgcggtctgggcttgctgttc-tctcgacagtagtcaggaagcccttacc 59
Query: 66 ccaaaaagtatct 78
|||||||||||||
Sbjct: 60 ccaaaaagtatct 72
>32729_rno-mir-129-1:mirbase
Length = 72
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccccaa 69
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 5 tctttttgcggtctgggcttgctgttc-tctccacagtagtcaggaagcccttaccccaa 63
Query: 70 aaagtatct 78
|||||||||
Sbjct: 64 aaagtatct 72
>27379_mdo-mir-129:mirbase
Length = 74
Score = 105 bits (53), Expect = 5e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 6 tggatctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttacc 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tggatctttttgcggtctgggcttgctgttccttaaatcagtagtcaggaagcccttacc 60
Query: 66 ccaaaaagtatct 78
|||||||||||||
Sbjct: 61 ccaaaaagtatct 73
>34287_dre-mir-129-1:mirbase
Length = 90
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 10 tctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccccaa 69
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 13 tctttttgcggtctgggcttgctgttccttgaaccagtagccaggaagcccttaccccaa 72
Query: 70 aaagtatctgc 80
|||||||||||
Sbjct: 73 aaagtatctgc 83
>34594_fru-mir-129-2:mirbase
Length = 73
Score = 83.8 bits (42), Expect = 2e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 10 tctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccccaa 69
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 5 tctttttgcggtctgggcttgctgttcctaagg-cagtagccaggaagcccttaccccaa 63
Query: 70 aaagtatctg 79
||||||||||
Sbjct: 64 aaagtatctg 73
>34741_tni-mir-129-2:mirbase
Length = 71
Score = 81.8 bits (41), Expect = 7e-17
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tctttttgcggtctgggcttgctgttcctctctacagtagtcaggaagcccttaccccaa 69
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 4 tctttttgcggtctgggcttgctgttcctaagg-cagtagccaggaagcccttaccccaa 62
Query: 70 aaagtatct 78
|||||||||
Sbjct: 63 aaagtatct 71
>34288_dre-mir-129-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgttc 36
||||||||||||||||||||||||||||
Sbjct: 12 atctttttgcggtctgggcttgctgttc 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 ggaagcccttaccccaaaaagtatctgcgg 82
||||||||||||||||||||| || |||||
Sbjct: 53 ggaagcccttaccccaaaaagcatttgcgg 82
>34593_fru-mir-129-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgttc 36
||||||||||||||||||||||||||||
Sbjct: 12 atctttttgcggtctgggcttgctgttc 39
>34740_tni-mir-129-1:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgttc 36
||||||||||||||||||||||||||||
Sbjct: 12 atctttttgcggtctgggcttgctgttc 39
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 ggaagcccttaccccaaaaagtatctgcggg 83
||||||||||||||||||||| || ||||||
Sbjct: 51 ggaagcccttaccccaaaaagcatttgcggg 81
>25770_xtr-mir-129-1:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 12 atctttttgcggtctgggcttgctgt 37
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 ggaagcccttaccccaaaaagtatctgcgg 82
||||||||||||||||||||| || |||||
Sbjct: 55 ggaagcccttaccccaaaaagcatttgcgg 84
>25771_xtr-mir-129-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctttttgcggtctgggcttgctgttc 36
||||||||||||||||||||||||||
Sbjct: 9 ctttttgcggtctgggcttgctgttc 34
>26458_tgu-mir-129:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 9 atctttttgcggtctgggcttgctgt 34
>27020_eca-mir-129b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 5 atctttttgcggtctgggcttgctgt 30
>27021_eca-mir-129b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 5 atctttttgcggtctgggcttgctgt 30
>27727_mml-mir-129-2:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 14 atctttttgcggtctgggcttgctgt 39
>28440_hsa-mir-129-2:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 13 atctttttgcggtctgggcttgctgt 38
>28441_hsa-mir-129-2:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 13 atctttttgcggtctgggcttgctgt 38
>30217_ptr-mir-129-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 12 atctttttgcggtctgggcttgctgt 37
>30826_ppy-mir-129-2:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 13 atctttttgcggtctgggcttgctgt 38
>31854_mmu-mir-129-2:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 13 atctttttgcggtctgggcttgctgt 38
>31855_mmu-mir-129-2:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 13 atctttttgcggtctgggcttgctgt 38
>32730_rno-mir-129-2:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 17 atctttttgcggtctgggcttgctgt 42
>33209_bta-mir-129-2:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 14 atctttttgcggtctgggcttgctgt 39
>33210_bta-mir-129-2:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 14 atctttttgcggtctgggcttgctgt 39
>33977_ssc-mir-129a:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||||
Sbjct: 9 atctttttgcggtctgggcttgctgt 34
>25478_pma-mir-129a:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 atctttttgcggtctgggcttgctgttc 36
||||||||||||| ||||||||||||||
Sbjct: 13 atctttttgcggtttgggcttgctgttc 40
>26697_cfa-mir-129-2:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ctttttgcggtctgggcttgctgt 34
||||||||||||||||||||||||
Sbjct: 1 ctttttgcggtctgggcttgctgt 24
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 ggaagcccttaccccaaaaag 73
|||||||||||||||||||||
Sbjct: 41 ggaagcccttaccccaaaaag 61
