miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33798_oar-mir-136:mirbase
Length = 92
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 65
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 66 aaatgagtcttcagagggttct 87
>33221_bta-mir-136:mirbase
Length = 92
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 65
Query: 61 aaatgagtcttcagagggttc 81
|||||||||||||||||||||
Sbjct: 66 aaatgagtcttcagagggttc 86
>27738_mml-mir-136:mirbase
Length = 92
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 65
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 66 aaatgagtcttcagagggttct 87
>28307_ggo-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>28452_hsa-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>30095_ppa-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>30227_ptr-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>30837_ppy-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttatgctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>32739_rno-mir-136:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tgagccctcggaggactccatttgttttgatgatggattcttaagctccatcatcgtctc 60
Query: 61 aaatgagtcttcagagggttct 82
||||||||||||||||||||||
Sbjct: 61 aaatgagtcttcagagggttct 82
>32507_mmu-mir-3071:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 2 gagccctcggaggactccatttgttttgatgatggattcttacgctccatcatcgtctca 61
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 80 gagccctcggaggactccatttgttttgatgatggattcttaagctccatcatcgtctca 21
Query: 62 aatgagtcttcagagggttc 81
||||||||||||||||||||
Sbjct: 20 aatgagtcttcagagggttc 1
>27032_eca-mir-136:mirbase
Length = 62
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 11 gaggactccatttgttttgatgatggattcttacgctccatcatcgtctcaaatgagtct 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggactccatttgttttgatgatggattcttacgctccatcatcgtctcaaatgagtct 60
Query: 71 tc 72
||
Sbjct: 61 tc 62
>31866_mmu-mir-136:mirbase
Length = 62
Score = 115 bits (58), Expect = 5e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 11 gaggactccatttgttttgatgatggattcttacgctccatcatcgtctcaaatgagtct 70
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gaggactccatttgttttgatgatggattcttaagctccatcatcgtctcaaatgagtct 60
Query: 71 tc 72
||
Sbjct: 61 tc 62
>26709_cfa-mir-136:mirbase
Length = 56
Score = 111 bits (56), Expect = 8e-26
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 15 actccatttgttttgatgatggattcttacgctccatcatcgtctcaaatgagtct 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccatttgttttgatgatggattcttacgctccatcatcgtctcaaatgagtct 56
