miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34130_ssc-mir-676:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aacgcgtgactcttcaatctcaggactcgcataattagcagaatgccgtcctaaggttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacgcgtgactcttcaatctcaggactcgcataattagcagaatgccgtcctaaggttgt 60
Query: 61 tgagttctgcgtttctgggc 80
||||||||||||||||||||
Sbjct: 61 tgagttctgcgtttctgggc 80
>26900_cfa-mir-676:mirbase
Length = 57
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 10 ctcttcaatctcaggactcgcataattagcagaatgccgtcctaaggttgttgagtt 66
|||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 1 ctcttcaatctcaggactcgcagaattaatggaatgccgtcctaaggttggtgagtt 57
>28991_hsa-mir-676:mirbase
Length = 67
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 7 tgactcttcaatctcaggactcgcataattagcagaatgccgtcctaaggttgttgagtt 66
||||||||||| ||||||||| ||| ||||| |||||| |||||||||||||||||||
Sbjct: 4 tgactcttcaacctcaggacttgcagaattaatggaatgctgtcctaaggttgttgagtt 63
>32292_mmu-mir-676:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 2e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 7 tgactcttcaatctcaggactcgcataattagcagaatgccgtcctaaggttgttgagtt 66
||||||| ||| || |||||| ||| ||||| |||||||||||| ||||||||||| |
Sbjct: 16 tgactctacaaccttaggacttgcagaattaaaggaatgccgtcctgaggttgttgagct 75
Query: 67 ctgcgtttctgggc 80
|||||||||||||
Sbjct: 76 gtgcgtttctgggc 89
