miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34136_ssc-mir-769:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgcgctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcgctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatct 60
Query: 61 ctggggtcttggttcagggt 80
||||||||||||||||||||
Sbjct: 61 ctggggtcttggttcagggt 80
>33458_bta-mir-769:mirbase
Length = 119
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 2 gcgctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatctc 61
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 20 gcgctctgacctgagacctccgggttctgagctgtgatgttgcttcccagctgggatctc 79
Query: 62 tggggtcttggttcagggt 80
|||||||| ||||||||||
Sbjct: 80 tggggtctcggttcagggt 98
>29007_hsa-mir-769:mirbase
Length = 118
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 4 gctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatctctg 63
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 21 gctctgacctgagacctctgggttctgagctgtgatgttgctctcgagctgggatctccg 80
Query: 64 gggtcttggttcaggg 79
||||||||||||||||
Sbjct: 81 gggtcttggttcaggg 96
>29008_hsa-mir-769:mirbase
Length = 118
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 4 gctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatctctg 63
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 21 gctctgacctgagacctctgggttctgagctgtgatgttgctctcgagctgggatctccg 80
Query: 64 gggtcttggttcaggg 79
||||||||||||||||
Sbjct: 81 gggtcttggttcaggg 96
>27268_eca-mir-769:mirbase
Length = 79
Score = 95.6 bits (48), Expect = 4e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 5 ctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatctctgg 64
||||| || ||||||||||||||||||||||||| || ||||| |||||||||||| ||
Sbjct: 4 ctctgcccggagacctctgggttctgagctgtgacgtggcttcggagctgggatctcggg 63
Query: 65 ggtcttggttcagggt 80
||||||||||||||||
Sbjct: 64 ggtcttggttcagggt 79
>27269_eca-mir-769:mirbase
Length = 79
Score = 95.6 bits (48), Expect = 4e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 5 ctctgacctgagacctctgggttctgagctgtgatgttgcttccaagctgggatctctgg 64
||||| || ||||||||||||||||||||||||| || ||||| |||||||||||| ||
Sbjct: 4 ctctgcccggagacctctgggttctgagctgtgacgtggcttcggagctgggatctcggg 63
Query: 65 ggtcttggttcagggt 80
||||||||||||||||
Sbjct: 64 ggtcttggttcagggt 79
>27270_eca-mir-769b:mirbase
Length = 93
Score = 79.8 bits (40), Expect = 3e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 17 acctctgggttctgagctgtgatgttgcttccaagctgggatctctggggtcttggttca 76
|||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||
Sbjct: 9 acctctgggttctgagctgtgacgtggcttctgagctgggatctcgggggtcttggttca 68
