miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34138_ssc-mir-885:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 cactcggcccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactcggcccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggg 60
Query: 61 gtgtagtggatagagcacgg 80
||||||||||||||||||||
Sbjct: 61 gtgtagtggatagagcacgg 80
>33464_bta-mir-885:mirbase
Length = 74
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>26912_cfa-mir-885:mirbase
Length = 74
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>27278_eca-mir-885:mirbase
Length = 74
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>27279_eca-mir-885:mirbase
Length = 74
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>28132_mml-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>28133_mml-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>29018_hsa-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>29019_hsa-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>30608_ptr-mir-885:mirbase
Length = 73
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>31255_ppy-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>31256_ppy-mir-885:mirbase
Length = 74
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 69 gatagagcacgg 80
||||||||||||
Sbjct: 61 gatagagcacgg 72
>27464_mdo-mir-885:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 48 gagaggcagcggggtgtagtggatagag 75
||||||||||| ||||||||||||||||
Sbjct: 44 gagaggcagcgtggtgtagtggatagag 71
