miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29034_hsa-mir-935:mirbase
          Length = 91

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
          ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7  ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 66

                              
Query: 61 ttccgctaccgccgccgctc 80
          ||||||||||||||||||||
Sbjct: 67 ttccgctaccgccgccgctc 86




>30621_ptr-mir-935:mirbase
          Length = 90

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
          ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 65

                              
Query: 61 ttccgctaccgccgccgctc 80
          ||||||||||||||||||||
Sbjct: 66 ttccgctaccgccgccgctc 85




>33010_rno-mir-935:mirbase
          Length = 91

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
          ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7  ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 66

                              
Query: 61 ttccgctaccgccgccgctc 80
          ||||||||||||||||||||
Sbjct: 67 ttccgctaccgccgccgctc 86




>33465_bta-mir-935:mirbase
          Length = 91

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
          ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7  ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 66

                              
Query: 61 ttccgctaccgccgccgctc 80
          ||||||||||||||||||||
Sbjct: 67 ttccgctaccgccgccgctc 86