miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33484_bta-mir-1296:mirbase
Length = 91
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 64
Query: 61 gttttgaccctaacccagctgggct 85
| ||||||||||||| |||||||||
Sbjct: 65 gctttgaccctaacctagctgggct 89
>27297_eca-mir-1296:mirbase
Length = 92
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6 cctaactgggttagggccctggctccatctcctttaggaaaaccttctttggggagtggg 65
Query: 61 gttttgaccctaacccagctgggct 85
| || ||||||||||||||||||||
Sbjct: 66 gcttcgaccctaacccagctgggct 90
>29154_hsa-mir-1296:mirbase
Length = 92
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 65
Query: 61 gttttgaccctaacccagctgggct 85
| || ||||||||||||| ||||||
Sbjct: 66 gcttcgaccctaacccaggtgggct 90
>30709_ptr-mir-1296:mirbase
Length = 91
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 65
Query: 61 gttttgaccctaacccagctgggct 85
| || ||||||||||||| ||||||
Sbjct: 66 gcttcgaccctaacccaggtgggct 90
>31351_ppy-mir-1296:mirbase
Length = 92
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 65
Query: 61 gttttgaccctaacccagctgggct 85
| || ||||||||||||| ||||||
Sbjct: 66 gcttcgaccctaacccaggtgggct 90
