miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>33489_bta-mir-1343:mirbase
          Length = 78

 Score =  149 bits (75), Expect = 3e-37
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gcttcggtgctggggagcggcccccgggcgggcctctgctctggcccctcctggggcccg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  gcttcggtgctggggagcggcccccgggcgggcctctgctctggcccctcctggggcccg 61

                         
Query: 61 cactctcgctccggg 75
          |||||||||||||||
Sbjct: 62 cactctcgctccggg 76




>29179_hsa-mir-1343:mirbase
          Length = 84

 Score =  127 bits (64), Expect = 1e-30
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                      
Query: 4  tcggtgctggggagcggcccccgggcgggcctctgctctggcccctcctggggcccgcac 63
          ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8  tcggtgctggggagcggcccccgggtgggcctctgctctggcccctcctggggcccgcac 67

                  
Query: 64 tctcgctc 71
          ||||||||
Sbjct: 68 tctcgctc 75