• Home
• Browse miRNAs
• Deep-seq predictions
• Mirtrons
• miRNA genes
• Degradomes
• Download
• Upload
• Contact

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>33741_bta-mir-2476:mirbase
          Length = 79

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 ccctgtggtctagtggttagaattc 36
          |||||||||||||||||||||||||
Sbjct: 16 ccctgtggtctagtggttagaattc 40

>34154_ssc-mir-2476-3:mirbase
          Length = 75

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tccctgtggtctagtggttagaatt 35
          |||||||||||||||||||||||||
Sbjct: 11 tccctgtggtctagtggttagaatt 35

>34152_ssc-mir-2476-1:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tccctgtggtctagtggttag 31
          |||||||||||||||||||||
Sbjct: 11 tccctgtggtctagtggttag 31