miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34152_ssc-mir-2476-1:mirbase
          Length = 94

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 5  gggagttccctgtggtctagtggttagaatttggcactt 43
          ||||||||||||||||||||||||||| | |||||||||
Sbjct: 5  gggagttccctgtggtctagtggttaggacttggcactt 43




>34153_ssc-mir-2476-2:mirbase
          Length = 68

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tccctgtggtctagtggttagaatt 35
          |||||||||||||||||||||||||
Sbjct: 11 tccctgtggtctagtggttagaatt 35




>33741_bta-mir-2476:mirbase
          Length = 79

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 ccctgtggtctagtggttagaatt 35
          ||||||||||||||||||||||||
Sbjct: 16 ccctgtggtctagtggttagaatt 39